共晶
分子动力学
晶体结构预测
分子间力
统计物理学
熵(时间箭头)
分子
化学物理
能源景观
密度泛函理论
晶体结构
计算化学
材料科学
化学
热力学
结晶学
物理
氢键
有机化学
作者
H.K. Song,Leslie Vogt-Maranto,Ren A. Wiscons,Adam J. Matzger,Mark E. Tuckerman
标识
DOI:10.1021/acs.jpclett.0c02647
摘要
Predicting structures of organic molecular cocrystals is a challenging task when considering the immense number of possible intermolecular orientations. Use of the Shannon information entropy, constructed from an intermolecular orientational spatial distribution function, to drive a search for crystal structures via enhanced molecular dynamics can be an efficient way to map out a landscape of putative polymorphs. Here, the Shannon entropy is used to generate a set of collective variables for differentiating polymorphs of a 1:1 cocrystal of resorcinol and urea. We show that driven adiabatic free energy dynamics, a particular enhanced-sampling approach, combined with these entropy variables, can transform the stable phase into alternate polymorphs. Density functional theory calculations confirm that a structure obtained from the enhanced molecular dynamics is stable at pressures above 1 GPa. We thus show that enhanced sampling should be considered an integral component of crystal structure searching protocols for systems with multiple independent molecules.
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