分子动力学
动力学(音乐)
化学
糖基化
微秒
蛋白质折叠
生物物理学
计算生物学
生物化学
生物
计算化学
物理
天文
声学
作者
Alen T. Mathew,Anurag T. K. Baidya,Bhanuranjan Das,Bharti Devi,Rajnish Kumar
出处
期刊:Proteins
[Wiley]
日期:2022-08-27
卷期号:91 (2): 147-160
被引量:14
摘要
Various posttranslational modifications like hyperphosphorylation, O-GlcNAcylation, and acetylation have been attributed to induce the abnormal folding in tau protein. Recent in vitro studies revealed the possible involvement of N-glycosylation of tau protein in the abnormal folding and tau aggregation. Hence, in this study, we performed a microsecond long all atom molecular dynamics simulation to gain insights into the effects of N-glycosylation on Asn-359 residue which forms part of the microtubule binding region. Trajectory analysis of the stimulations coupled with essential dynamics and free energy landscape analysis suggested that tau, in its N-glycosylated form tends to exist in a largely folded conformation having high beta sheet propensity as compared to unmodified tau which exists in a large extended form with very less beta sheet propensity. Residue interaction network analysis of the lowest energy conformations further revealed that Phe378 and Lys353 are the functionally important residues in the peptide which helped in initiating the folding process and Phe378, Lys347, and Lys370 helped to maintain the stability of the protein in the folded state.
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