Prognosis and biological function of SGOL1 in clear cell renal cell carcinoma: a multiomics analysis

生物 肾透明细胞癌 癌症研究 细胞周期 细胞生长 微阵列分析技术 基因表达 细胞 肿瘤科 肾细胞癌 医学 基因 遗传学
作者
Zezhong Yang,Yunzhong Jiang,Lu Wang,Bo Yu,Hui Cai,Jinhai Fan,Mengzhao Zhang
出处
期刊:BMC Medical Genomics [Springer Nature]
卷期号:17 (1)
标识
DOI:10.1186/s12920-024-01825-7
摘要

Abstract Background Shugoshin-1 (SGOL1) is a mammalian ortholog of Shugoshin in yeast and is essential for precise chromosome segregation during mitosis and meiosis. Aberrant SGOL1 expression was reported to be closely correlated with the malignant progression of various tumors. However, the expression pattern and biological function of SGOL1 in clear cell renal cell carcinoma (ccRCC) are unclear. Methods The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) databases provide mRNA expression data and outcome information for ccRCC patients. Immunohistochemistry (IHC) of ccRCC tissue chips verified SGOL1 protein expression in ccRCC patients. Data processing and visualization were performed with the UALCAN, TISIDB, TIMER, GSCA, LinkedOmics, and starBase databases. Gene Ontology (GO) annotation and gene set enrichment analysis (GSEA) were used to identify SGOL1-related biological functions and signaling pathways. Immune infiltration analysis was performed using the TISIDB database, ssGSEA algorithm, and TCGA-KIRC cohort. The biological role of SGOL1 in ccRCC was investigated using a series of in vitro cytological assays, including the MTT assay, EdU staining assay, flow cytometry analysis, Transwell assay, and wound healing assay. Results SGOL1 was highly expressed in ccRCC and linked to adverse clinicopathological parameters and unfavorable prognosis. Multivariate logistic regression and nomogram calibration suggested that SGOL1 might serve as an independent and reliable prognostic predictor of ccRCC. Functional enrichment analysis indicated that SGOL1 may be involved in the cell cycle, the p53 pathway, DNA replication, and T-cell activation. Furthermore, tumor microenvironment (TME) analysis suggested that SGOL1 was positively associated with Treg infiltration and immune checkpoint upregulation. In addition, we identified a potential SNHG17/PVT1/ZMIZ1-AS1-miR-23b-3p-SGOL1 axis correlated with ccRCC carcinogenesis and progression. Finally, we demonstrated that SGOL1 promoted ccRCC cell proliferation, migratory capacity, and invasion in vitro. Conclusions SGOL1 potentially functions as an oncogene in ccRCC progression and might contribute to the immunosuppressive TME by increasing Treg infiltration and checkpoint expression, suggesting that targeting SGOL1 could be a novel therapeutic strategy for the treatment of ccRCC patients.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
更新
大幅提高文件上传限制,最高150M (2024-4-1)

科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
陶醉的大白完成签到 ,获得积分10
1秒前
2秒前
t3t3t3t3完成签到,获得积分10
3秒前
3秒前
云瑾应助vincent采纳,获得10
3秒前
摇摇摇完成签到 ,获得积分10
4秒前
不安青牛应助jinyu采纳,获得10
4秒前
4秒前
4秒前
6秒前
韶雁开完成签到,获得积分10
6秒前
7秒前
今后应助CWNU_HAN采纳,获得30
7秒前
爱学习的小羊完成签到,获得积分10
9秒前
葡萄冻冻发布了新的文献求助10
9秒前
ZYC完成签到,获得积分20
10秒前
iVANPENNY应助122采纳,获得10
12秒前
13秒前
紫色翡翠完成签到,获得积分10
13秒前
SciGPT应助111采纳,获得30
13秒前
爆米花应助huihuiwang采纳,获得10
14秒前
袁不评发布了新的文献求助20
15秒前
不安青牛应助jinyu采纳,获得10
16秒前
要开心吖发布了新的文献求助10
17秒前
Jack123完成签到,获得积分10
18秒前
18秒前
包包包完成签到,获得积分10
19秒前
20秒前
蜡笔小鑫完成签到,获得积分10
20秒前
Hello应助lxy采纳,获得10
21秒前
25秒前
123发布了新的文献求助10
26秒前
26秒前
三七发布了新的文献求助20
28秒前
小二郎应助钻石采纳,获得10
29秒前
晨夕风发布了新的文献求助10
30秒前
31秒前
aaaa完成签到,获得积分10
31秒前
123444完成签到,获得积分10
31秒前
33秒前
高分求助中
Formgebungs- und Stabilisierungsparameter für das Konstruktionsverfahren der FiDU-Freien Innendruckumformung von Blech 1000
One Man Talking: Selected Essays of Shao Xunmei, 1929–1939 1000
The Illustrated History of Gymnastics 800
Yuwu Song, Biographical Dictionary of the People's Republic of China 800
The Bourse of Babylon : market quotations in the astronomical diaries of Babylonia 680
Division and square root. Digit-recurrence algorithms and implementations 500
機能營養學前瞻(3 Ed.) 300
热门求助领域 (近24小时)
化学 材料科学 医学 生物 有机化学 工程类 生物化学 纳米技术 物理 内科学 计算机科学 化学工程 复合材料 遗传学 基因 物理化学 催化作用 电极 光电子学 量子力学
热门帖子
关注 科研通微信公众号,转发送积分 2503175
求助须知:如何正确求助?哪些是违规求助? 2156854
关于积分的说明 5519457
捐赠科研通 1877226
什么是DOI,文献DOI怎么找? 933721
版权声明 563890
科研通“疑难数据库(出版商)”最低求助积分说明 498740