Structure‐based virtual screening aids the identification of glycosyltransferases in the biosynthesis of salidroside

糖基化 糖基转移酶 生物 生物合成 虚拟筛选 转录组 计算生物学 红景天苷 生物化学 连接器 鉴定(生物学) 基因 植物 药物发现 计算机科学 基因表达 操作系统 药理学
作者
Yan Yao,Fangfang Chen,Chaoyan Wu,Xiaosa Chang,Weijia Cheng,Qiuxia Wang,Zixin Deng,Tiangang Liu,Li Lü
出处
期刊:Plant Biotechnology Journal [Wiley]
卷期号:23 (5): 1725-1735 被引量:11
标识
DOI:10.1111/pbi.70002
摘要

Glycosylation plays an important role in the structural diversification of plant natural products. The identification of efficient glycosyltransferases is also a crucial step for the biosynthesis of valuable glycoside products. However, functional characterization of glycosyltransferases (GTs) from an extensive plant gene list is labour-intensive and challenging. Salidroside is a bioactive component derived from plants, widely utilized in the fields of food and medicine. Here, through transcriptome analysis and structure-based virtual screening, we identified two GTs that participated in the biosynthesis of salidroside from a rarely studied herbaceous plant, Astilbe chinensis. Ach15909 was found to possess high catalytic activity as evidenced by the determination of its catalytic parameters. The key residues that determine its catalytic activity were further determined. Additionally, Ach15909 shows a preference for substrates with a volume of <150 Å3, and replacing the interdomain linker region located between the N- and C-terminal domains of Ach15909 allows it to accept substrates that were previously not catalyzable. Overall, the structure-based virtual screening approach showed high efficiency and cost-effectiveness; the successful identification of GTs in salidroside glycosylation sheds light on uncovering additional plant biosynthesis enzymes in the forthcoming research.
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