生物
外显子组测序
外显子组
弥漫性大B细胞淋巴瘤
疾病
转录组
计算生物学
淋巴瘤
遗传学
基因
突变
基因表达
内科学
免疫学
医学
作者
Anupama Reddy,Jenny Zhang,Nicholas S. Davis,Andrea B. Moffitt,Cassandra Love,Alexander Waldrop,Sirpa Leppä,Annika Pasanen,Leo Meriranta,Marja-Liisa Karjalainen-Lindsberg,Peter Nørgaard,Mette Ølgod Pedersen,Anne Ortved Gang,Estrid Høgdall,Tayla B. Heavican,Waseem Lone,Javeed Iqbal,Qiu Qin,Guojie Li,So Young Kim
出处
期刊:Cell
[Cell Press]
日期:2017-10-01
卷期号:171 (2): 481-494.e15
被引量:968
标识
DOI:10.1016/j.cell.2017.09.027
摘要
Diffuse large B cell lymphoma (DLBCL) is the most common form of blood cancer and is characterized by a striking degree of genetic and clinical heterogeneity. This heterogeneity poses a major barrier to understanding the genetic basis of the disease and its response to therapy. Here, we performed an integrative analysis of whole-exome sequencing and transcriptome sequencing in a cohort of 1,001 DLBCL patients to comprehensively define the landscape of 150 genetic drivers of the disease. We characterized the functional impact of these genes using an unbiased CRISPR screen of DLBCL cell lines to define oncogenes that promote cell growth. A prognostic model comprising these genetic alterations outperformed current established methods: cell of origin, the International Prognostic Index comprising clinical variables, and dual MYC and BCL2 expression. These results comprehensively define the genetic drivers and their functional roles in DLBCL to identify new therapeutic opportunities in the disease.
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