Challenges and Advances in the Diagnosis of Bloodstream Infection

梅德林 图书馆学 医学实验室 医学 生物 病理 计算机科学 生物化学
作者
Yajing Song,Michael Neff,Péter Gyarmati
出处
期刊:Future Microbiology [Future Medicine]
卷期号:17 (5): 311-314
标识
DOI:10.2217/fmb-2021-0304
摘要

Future MicrobiologyVol. 17, No. 5 EditorialChallenges and advances in the diagnosis of bloodstream infectionYajing Song, Michael Neff & Peter GyarmatiYajing SongCancer Biology and Pharmacology, University of Illinois College of Medicine, Peoria, IL, USA, Michael NeffCancer Biology and Pharmacology, University of Illinois College of Medicine, Peoria, IL, USA & Peter Gyarmati *Author for correspondence: E-mail Address: gyarmati@uic.eduhttps://orcid.org/0000-0001-7362-316XCancer Biology and Pharmacology, University of Illinois College of Medicine, Peoria, IL, USAPublished Online:17 Feb 2022https://doi.org/10.2217/fmb-2021-0304AboutSectionsView ArticleView Full TextPDF/EPUB ToolsAdd to favoritesDownload CitationsTrack CitationsPermissionsReprints ShareShare onFacebookTwitterLinkedInRedditEmail View articleKeywords: blood culturebloodstream infectionhigh-throughput sequencingmetagenomicsmolecular detectionReferences1. Liesenfeld O, Lehman L, Hunfeld KP, Kost G. Molecular diagnosis of sepsis: new aspects and recent developments. Eur. J. Microbiol. Immunol. 4(1), 1–25 (2014).Crossref, Medline, CAS, Google Scholar2. Dinan MA, Hirsch BR, Lyman GH. Management of chemotherapy-induced neutropenia: measuring quality, cost, and value. J. Natl Compr. Canc. Netw. 13(1), 1–7 (2015).Crossref, Medline, Google Scholar3. Fleischmann C, Scherag A, Adhikari NK et al. Assessment of global incidence and mortality of hospital-treated sepsis. Current estimates and limitations. Am. J. Respir. Crit. Care Med. 193(3), 259–272 (2016).Crossref, Medline, CAS, Google Scholar4. Battle SE, Bookstaver PB, Justo JA, Kohn J, Albrecht H, Al-Hasan MN. Association between inappropriate empirical antimicrobial therapy and hospital length of stay in Gram-negative bloodstream infections: stratification by prognosis. J. Antimicrob. Chemother. 72(1), 299–304 (2017).Crossref, Medline, CAS, Google Scholar5. Garcia-Vidal C, Cardozo-Espinola C, Puerta-Alcalde P et al. Risk factors for mortality in patients with acute leukemia and bloodstream infections in the era of multiresistance. PLoS ONE 13(6), e0199531 (2018).Crossref, Medline, Google Scholar6. Ammerlaan HS, Harbarth S, Buiting AG et al. Secular trends in nosocomial bloodstream infections: antibiotic-resistant bacteria increase the total burden of infection. Clin. Infect. Dis. 56(6), 798–805 (2013).Crossref, Medline, CAS, Google Scholar7. Paul M, Kariv G, Goldberg E et al. Importance of appropriate empirical antibiotic therapy for methicillin-resistant Staphylococcus aureus bacteraemia. J. Antimicrob. Chemother. 65(12), 2658–2665 (2010).Crossref, Medline, CAS, Google Scholar8. Ohrmalm L, Wong M, Aust C et al. Viral findings in adult hematological patients with neutropenia. PLoS ONE 7(5), e36543 (2012).Crossref, Medline, Google Scholar9. Gyarmati P, Kjellander C, Aust C, Song Y, Öhrmalm L, Giske CG. Metagenomic analysis of bloodstream infections in patients with acute leukemia and therapy-induced neutropenia. Sci. Rep. 6, 23532 (2016).Crossref, Medline, CAS, Google Scholar10. Grumaz S, Stevens P, Grumaz C et al. Next-generation sequencing diagnostics of bacteremia in septic patients. Genome Med. 8(1), 73 (2016).Crossref, Medline, Google Scholar11. Gyarmati P, Kjellander C, Aust C, Kalin M, Öhrmalm L, Giske CG. Bacterial landscape of bloodstream infections in neutropenic patients via high throughput sequencing. PLoS ONE 10(8), e0135756 (2015).Crossref, Medline, Google Scholar12. Ecker DJ, Sampath R, Li H et al. New technology for rapid molecular diagnosis of bloodstream infections. Expert Rev. Mol. Diagn. 10(4), 399–415 (2010).Crossref, Medline, CAS, Google Scholar13. Song Y, Giske CG, Gille-Johnson P, Emanuelsson O, Lundeberg J, Gyarmati P. Nuclease-assisted suppression of human DNA background in sepsis. PLoS ONE 9(7), e103610 (2014).Crossref, Medline, Google Scholar14. Stewart EJ. Growing unculturable bacteria. J. Bacteriol. 194(16), 4151–4160 (2012).Crossref, Medline, CAS, Google Scholar15. Song Y, Gyarmati P. Optimized detection of bacteria in bloodstream infections. PLoS ONE 14(6), e0219086 (2019).Crossref, Medline, CAS, Google Scholar16. Horiba K, Torii Y, Okumura T et al. Next-generation sequencing to detect pathogens in pediatric febrile neutropenia: a single-center retrospective study of 112 cases. Open Forum Infect. Dis. 8(11), ofab223 (2021).Crossref, Medline, Google Scholar17. Hogan CA, Yang S, Garner OB et al. Clinical impact of metagenomic next-generation sequencing of plasma cell-free DNA for the diagnosis of infectious diseases: a multicenter retrospective cohort study. Clin. Infect. Dis. 72(2), 239–245 (2021).Crossref, Medline, CAS, Google Scholar18. Dargère S, Cormier H, Verdon R. Contaminants in blood cultures: importance, implications, interpretation and prevention. Clin. Microbiol. Infect. 24(9), 964–969 (2018).Crossref, Medline, CAS, Google Scholar19. Kumar SS, Ghosh AR. Assessment of bacterial viability: a comprehensive review on recent advantages and challenges. Microbiology (Reading) 165(6), 593–610 (2019).Crossref, Medline, CAS, Google Scholar20. Korem T, Zeevi D, Suez J et al. Growth dynamics of gut microbiota in health and disease inferred from single metagenomic samples. Science 349(6252), 1101–1106 (2015).Crossref, Medline, CAS, Google ScholarFiguresReferencesRelatedDetails Vol. 17, No. 5 STAY CONNECTED Metrics Downloaded 157 times History Received 12 December 2021 Accepted 16 December 2021 Published online 17 February 2022 Published in print March 2022 Information© 2022 Future Medicine LtdKeywordsblood culturebloodstream infectionhigh-throughput sequencingmetagenomicsmolecular detectionFinancial & competing interests disclosureThe authors have no relevant affiliations or financial involvement with any organization or entity with a financial interest in or financial conflict with the subject matter or materials discussed in the manuscript. This includes employment, consultancies, honoraria, stock ownership or options, expert testimony, grants or patents received or pending, or royalties.No writing assistance was utilized in the production of this manuscript.PDF download
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
更新
PDF的下载单位、IP信息已删除 (2025-6-4)

科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
刚刚
刚刚
钟奇发布了新的文献求助10
刚刚
顾矜应助含蓄的荔枝采纳,获得10
1秒前
1秒前
1秒前
1秒前
那些兔儿完成签到 ,获得积分0
2秒前
Phantom1234完成签到,获得积分10
2秒前
研友_LJpJaZ发布了新的文献求助10
2秒前
2秒前
张星星完成签到 ,获得积分10
2秒前
2秒前
寒江月完成签到,获得积分10
4秒前
科研助手6应助w7采纳,获得10
4秒前
隐形曼青应助姜颖采纳,获得10
5秒前
HY发布了新的文献求助10
5秒前
机灵迎海完成签到,获得积分10
5秒前
Macy-Zhao发布了新的文献求助10
5秒前
俞无声完成签到 ,获得积分10
6秒前
科研通AI2S应助supershiyi11采纳,获得10
6秒前
6秒前
天天快乐应助南瓜采纳,获得10
6秒前
6秒前
yangbin710发布了新的文献求助30
7秒前
杨诗梦完成签到,获得积分10
7秒前
7秒前
Z2222发布了新的文献求助30
8秒前
Hello应助朴实的手套采纳,获得10
9秒前
wanci应助liuz采纳,获得10
9秒前
山楂酱完成签到,获得积分10
9秒前
温温完成签到,获得积分20
10秒前
赘婿应助河水弯弯采纳,获得10
10秒前
CCL完成签到,获得积分10
10秒前
Zzz完成签到,获得积分10
11秒前
CIXI完成签到,获得积分10
11秒前
nnnn发布了新的文献求助10
11秒前
ewmmel发布了新的文献求助10
11秒前
bc发布了新的文献求助10
12秒前
CipherSage应助欧尼采纳,获得10
13秒前
高分求助中
(禁止应助)【重要!!请各位详细阅读】【科研通的精品贴汇总】 10000
Diagnostic Imaging: Pediatric Neuroradiology 2000
Semantics for Latin: An Introduction 1099
Biology of the Indian Stingless Bee: Tetragonula iridipennis Smith 1000
Battery Management Systems, Volume lll: Physics-Based Methods 800
Robot-supported joining of reinforcement textiles with one-sided sewing heads 740
Corpus Linguistics for Language Learning Research 300
热门求助领域 (近24小时)
化学 材料科学 医学 生物 工程类 有机化学 生物化学 物理 内科学 纳米技术 计算机科学 化学工程 复合材料 遗传学 基因 物理化学 催化作用 冶金 细胞生物学 免疫学
热门帖子
关注 科研通微信公众号,转发送积分 4138075
求助须知:如何正确求助?哪些是违规求助? 3674757
关于积分的说明 11616453
捐赠科研通 3369404
什么是DOI,文献DOI怎么找? 1850881
邀请新用户注册赠送积分活动 914165
科研通“疑难数据库(出版商)”最低求助积分说明 829103