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Streptomyces corallincola and Kineosporia corallincola sp. nov., two new coral-derived marine actinobacteria

生物 肽聚糖 放线菌门 16S核糖体RNA 二氨基酸 二氨基二甲酸 微生物学 磷脂酰甘油 放线菌 磷脂酰肌醇 链霉菌 拉伤 生物化学 化学分类学 细胞壁 细菌 植物 磷脂 分类学(生物学) 基因 磷脂酰胆碱 遗传学 基因序列 激酶 解剖
作者
Kusuma Buangrab,Makamas Sutthacheep,Thamasak Yeemin,Enjuro Harunari,Yasuhiro Igarashi,Paranee Sripreechasak,Pawina Kanchanasin,Somboon Tanasupawat,Wongsakorn Phongsopitanun
出处
期刊:International Journal of Systematic and Evolutionary Microbiology [Microbiology Society]
卷期号:72 (2) 被引量:14
标识
DOI:10.1099/ijsem.0.005249
摘要

Two new marine actinobacteria, designated as J2-1T and J2-2T, were isolated from a coral, Favites pentagona, collected from Rayong Province, Thailand. The taxonomic positions of the two strains were identified based on polyphasic taxonomy. Based on morphological characteristics and chemotaxonomy, strains J2-1T and J2-2T were identified as members of the genus Streptomyces and Kineosporia, respectively. Strains J2-1T and J2-2T showed the highest 16S rRNA gene sequence similarity to Streptomyces broussonetiae T44T (98.62 %) and Kineosporia babensis VN05A0415T (98.08 %), respectively. Strain J2-1T had chemotaxonomic properties resembling members of the genus Streptomyces. ll-Diaminopimelic acid, glucose and ribose were detected in the whole-cell hydrolysate. Diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol, phosphatidylinositolmannoside, unidentified aminolipid and five unidentified phospholipids were detected as the polar lipids. The major cellular fatty acids were C16 : 0 iso, C15 : 0 anteiso, C15 : 0 iso, C16 : 0, C17 : 0 anteiso, C14 : 0 iso and C17 : 0 iso. Strain J2-2T a showed similar cell composition to members of the genus Kineosporia. Both isomers of ll- and meso-diaminopimelic acid were detected in the peptidoglycan. Arabinose, galactose, madurose and xylose were observed in the whole-cell hydrolysate. The polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol, phosphatidylinositol mannoside, phosphatidylcholine, an unidentified phospholipid and an unidentified glycolipid. The major cellular fatty acids were C16 : 0, C18 : 1 ω9c, C18 : 0 10-methyl, tuberculostearic acid, C18 : 0 and C17 : 0. Both strains could be distinguished from their closely related type strains according to their phenotypic characteristics. Comparative genome analysis indicated the delineation of two novel species based on digital DNA-DNA hybridization and average nucleotide identity values, which were below 70 and 95 %, respectively. The names proposed are Streptomyces corallincola sp. nov. (J2-1T=TBRC 13503T=NBRC 115066T) and Kineosporia corallincola sp. nov. (J2-2T=TBRC 13504T=NBRC 114885T).

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