Investigation by DFT Methods of the Damage of Human Serum Albumin Including Amino Acid Derivative Schiff Base Zn(II) Complexes by IR-FEL Irradiation

席夫碱 人血清白蛋白 密度泛函理论 化学 二肽 红外光谱学 酰胺 结晶学 亚胺 含时密度泛函理论 圆二色性 光化学 氨基酸 计算化学 有机化学 催化作用 生物化学 色谱法
作者
Yuika Onami,Ryousuke Koya,Takayasu Kawasaki,Hiroki Aizawa,Ryo Nakagame,Yoshito Miyagawa,Tomoyuki Haraguchi,Takashiro Akitsu,Koichi Tsukiyama∥,M. Alcolea Palafox
出处
期刊:International Journal of Molecular Sciences [Multidisciplinary Digital Publishing Institute]
卷期号:20 (11): 2846-2846 被引量:12
标识
DOI:10.3390/ijms20112846
摘要

An infrared free electron laser (IR-FEL) can decompose aggregated proteins by excitation of vibrational bands. In this study, we prepared hybrid materials of protein (human serum albumin; HSA) including several new Schiff base Zn(II) complexes incorporating amino acid (alanine and valine) or dipeptide (gly-gly) derivative moieties, which were synthesized and characterized with UV-vis, circular dichroism (CD), and IR spectra. Density functional theory (DFT) and time dependent DFT (TD-DFT) calculations were also performed to investigate vibrational modes of the Zn(II) complexes. An IR-FEL was used to irradiate HSA as well as hybrid materials of HSA-Zn(II) complexes at wavelengths corresponding to imine C=N, amide I, and amide II bands. Analysis of secondary structures suggested that including a Zn(II) complex into HSA led to the structural change of HSA, resulting in a more fragile structure than the original HSA. The result was one of the characteristic features of vibrational excitation of IR-FEL in contrast to electronic excitation by UV or visible light.

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