基因
转录组
生物
骨骼肌
遗传学
脂肪组织
基因表达
基因表达谱
计算生物学
解剖
内分泌学
作者
Sihu Wang,Sayed Haidar Abbas Raza,Chugang Mei,Kai Zhu,Matthew D. Garcia,Nicola M. Schreurs,Chengcheng Liang,Xinran Yang,Linsen Zan
标识
DOI:10.1016/j.ejbt.2020.09.004
摘要
Background: To identify differentially expressed genes (DEGs) between muscle and adipose in cattle, we analyzed the data from the RNA sequencing of three Angus × Qinchuan crossbred cattle. Results: Searched the Gene Expression Omnibus (GEO) for a microarray dataset of Yan yellow cattle, GSE49992. After the DEGs were identified, we used STRING and Cytoscape to construct a protein–protein interaction (PPI) network, subsequently analyzing the major modules of key genes. In total, 340 DEGs were discovered, including 21 hub genes, which were mainly enriched in muscle contraction, skeletal muscle contraction, troponin complex, lipid particle, Z disc, tropomyosin binding, and actin filament binding. Conclusions: In summary, these genes can be regarded as candidate biomarkers for the regulation of muscle and adipose development. Normal 0 false false false EN-US X-NONE X-NONE /* Style Definitions */
table.MsoNormalTable
{mso-style-name:Tabla normal;
mso-tstyle-rowband-size:0;
mso-tstyle-colband-size:0;
mso-style-noshow:yes;
mso-style-priority:99;
mso-style-parent:;
mso-padding-alt:0cm 5.4pt 0cm 5.4pt;
mso-para-margin-top:0cm;
mso-para-margin-right:0cm;
mso-para-margin-bottom:8.0pt;
mso-para-margin-left:0cm;
line-height:107%;
mso-pagination:widow-orphan;
font-size:11.0pt;
font-family:Calibri,sans-serif;
mso-ascii-font-family:Calibri;
mso-ascii-theme-font:minor-latin;
mso-hansi-font-family:Calibri;
mso-hansi-theme-font:minor-latin;
mso-bidi-font-family:Times New Roman;
mso-bidi-theme-font:minor-bidi;}
科研通智能强力驱动
Strongly Powered by AbleSci AI