全基因组测序
生物
基因组
生物病虫害防治
遗传学
计算生物学
序列(生物学)
多粘菌拟杆菌
拟杆菌
基因
植物
细菌
16S核糖体RNA
作者
Shanwen Ding,Zijun Ma,Yafei Tang,Yu Lin,Zifu He,Xiaoman She
出处
期刊:BMC Genetics
[BioMed Central]
日期:2025-03-17
卷期号:26 (1): 18-18
标识
DOI:10.1186/s12863-025-01310-9
摘要
Strain BB507 was isolated from a pine rhizosphere in Meizhou city, Guangdong province of China, and showed antibacterial activity against Ralstonia solanacearum species complex. Complete genome was sequenced using Illumina NovaSeq (second-generation) and Oxford Nanopore (third-generation) platforms. The genome of BB507 comprised of a 6,974,531 bp circular chromosome and a 352,197 bp circular plasmid, encoding a total of 6,649 gene with an average gene length of 950 bp, 103 transfer RNAs, 2 sRNAs, and 36 rRNAs. Three candidate CRISPRs, 6 genomic islands and 14 prophages were predicted. The bacterial orthologous average nucleotide identity (OAT) and the type genome server (TYGS) analysis highlighted the strain BB507 was clustered into a subgroup with P. taichungensis. antiSMASH v7.0 predicted the presence of 10 secondary metabolite gene clusters in the genome. These findings will serve as a useful resource for further research in industrial and agricultural biotechnology.
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