Identification of key microRNAs in exosomes derived from patients with the severe acute pancreatitis

微泡 小RNA 小桶 基因 外体 计算生物学 医学 转录组 生物信息学 生物 基因表达 遗传学
作者
Yuanxu Qu,Yixuan Ding,Jiongdi Lu,Yuchen Jia,Chunjing Bian,Yulin Guo,Zhi Zheng,Wentong Mei,Feng Cao,Fēi Li
出处
期刊:Asian Journal of Surgery [Elsevier]
卷期号:46 (1): 337-347 被引量:5
标识
DOI:10.1016/j.asjsur.2022.04.032
摘要

Exosomes have been identified as important carriers of various genetic materials, including microRNAs (miRNAs). Increasing evidence indicates that the course of severe acute pancreatitis (SAP) is associated with miRNAs transported by exosomes. We aimed to identify the signature miRNAs as biomarkers of SAP.We obtained exosomes from the SAP patients' blood. After separation, purification, and identification, we performed high-throughput sequencing and screened the differentially expressed(DE) miRNAs in the exosomes. Bioinformatics analysis was performed to identified the target genes of the miRNAs and the pathways enriched based on Gene Ontology and Kyoto Encyclopedia of Genes and Genomes analyses, and selected the key miRNAs related to SAP. Total RNA was extracted from patient serum exosomes to detect the expression levels of the selected miRNAs in exosomes of three experimental groups (mild -, moderately severe -, and severe AP) and a control group, using Real-time quantitative polymerase chain reaction (RT-qPCR).272 DE miRNAs were identified between SAP and control group. Using bioinformatics analysis, we determined that the functions of the target genes were enriched in six signaling pathways including focal adhesion. Based on this, seven candidate signature miRNAs were selected: miR-603, miR-548ad-5p, miR-122-5p, miR-4477a, miR-192-5p, miR-215-5p, and miR-583. The RT-qPCR results of the seven miRNAs in the SAP group were consistent with the sequencing results.Exosome-derived miR-603, miR-548ad-5p, miR-122-5p, miR-4477a, miR-192-5p, miR-215-5p, miR-583 are positively correlated with SAP, which might provide new insights into the pathogenesis of SAP and serve as the biomarkers of SAP.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
更新
大幅提高文件上传限制,最高150M (2024-4-1)

科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
7秒前
9秒前
田様应助优秀的冬天采纳,获得10
11秒前
CWNU_HAN应助大胆的香寒采纳,获得30
11秒前
dwj发布了新的文献求助100
15秒前
香蕉觅云应助愤怒的水壶采纳,获得10
16秒前
18秒前
22秒前
loker完成签到 ,获得积分10
26秒前
世界独行发布了新的文献求助10
27秒前
27秒前
28秒前
29秒前
优秀的夜白完成签到,获得积分10
30秒前
33秒前
askaga发布了新的文献求助10
34秒前
38秒前
40秒前
完美世界应助等待的问夏采纳,获得10
45秒前
共享精神应助CY采纳,获得30
45秒前
完美世界应助alan采纳,获得10
50秒前
SGOM发布了新的文献求助30
51秒前
Jadon完成签到 ,获得积分10
53秒前
领导范儿应助ma15homes采纳,获得10
54秒前
smellycat完成签到,获得积分10
54秒前
dong完成签到 ,获得积分10
59秒前
askaga完成签到,获得积分10
59秒前
59秒前
1分钟前
ACCLIMATIZE发布了新的文献求助10
1分钟前
欣慰傲薇发布了新的文献求助10
1分钟前
1分钟前
1分钟前
keyantong完成签到,获得积分10
1分钟前
shufeiyan发布了新的文献求助10
1分钟前
1分钟前
北珏发布了新的文献求助10
1分钟前
1分钟前
今麦郎完成签到,获得积分20
1分钟前
解泽星完成签到,获得积分10
1分钟前
高分求助中
Teaching Social and Emotional Learning in Physical Education 900
Plesiosaur extinction cycles; events that mark the beginning, middle and end of the Cretaceous 800
Chinese-English Translation Lexicon Version 3.0 500
Recherches Ethnographiques sue les Yao dans la Chine du Sud 500
Two-sample Mendelian randomization analysis reveals causal relationships between blood lipids and venous thromboembolism 500
[Lambert-Eaton syndrome without calcium channel autoantibodies] 460
Wisdom, Gods and Literature Studies in Assyriology in Honour of W. G. Lambert 400
热门求助领域 (近24小时)
化学 材料科学 医学 生物 有机化学 工程类 生物化学 纳米技术 物理 内科学 计算机科学 化学工程 复合材料 遗传学 基因 物理化学 催化作用 电极 光电子学 量子力学
热门帖子
关注 科研通微信公众号,转发送积分 2394782
求助须知:如何正确求助?哪些是违规求助? 2098278
关于积分的说明 5287943
捐赠科研通 1825789
什么是DOI,文献DOI怎么找? 910303
版权声明 559972
科研通“疑难数据库(出版商)”最低求助积分说明 486519