肺结核
结核分枝杆菌
分子流行病学
流行病学
传输(电信)
单核苷酸多态性
入射(几何)
病毒学
谱系(遗传)
抗药性
医学
生物
遗传学
基因型
基因
内科学
病理
电气工程
工程类
物理
光学
作者
Jiahui Zhu,Marjo Haanperä,Silja Mentula,Olli Vapalahti,Hanna Soini,Tarja Sironen,Ravi Kant,Fathiah Zakham
出处
期刊:Tuberculosis
[Elsevier BV]
日期:2024-02-01
卷期号:: 102492-102492
标识
DOI:10.1016/j.tube.2024.102492
摘要
Data on the molecular epidemiology and transmission of drug-resistant Mycobacterium tuberculosis (MTB) in low-incidence settings with immigration from high-incidence settings is limited. We included 115 drug-resistant (DR) MTB isolates with whole-genome sequencing data isolated in Finland between 2014 and 2021. Potential transmission clusters were identified using a threshold of 12 single-nucleotide polymorphisms (SNPs). Highly related clusters were identified using a threshold of 5 SNPs. Of the 115 DR MTB isolates, 31 (27.0%) isolates were from Finnish-born cases and 84 (73.0%) were from foreign-born cases. The proportion of multidrug-resistant (MDR) MTB isolates (30/84, 35.7%) from foreign-born cases was higher than that of MDR MTB isolates from Finnish-born cases (8/31, 25.8%). Lineage 2 (40/115, 34.8%) and lineage 4 (40/115, 34.8%) were the most prevalent lineages. A total of 25 (21.7%) isolates were classified into eight potential transmission clusters (≤12 SNPs). Furthermore, five highly related clusters (≤5 SNPs) were identified, including three DR MTB isolates from Finnish-born cases and 14 DR isolates from foreign-born cases. The risk of DR MTB transmission between Finnish- and foreign-born persons is not negligible. Further research on clustering analysis in drug-susceptible MTB is worth to inform tuberculosis management and control in low-incidence settings with increasing immigration.
科研通智能强力驱动
Strongly Powered by AbleSci AI