Mining novel cell glycolysis related gene markers that can predict the survival of colon adenocarcinoma patients.

结直肠癌 厌氧糖酵解 内科学 瓦博格效应 肿瘤科 巴基斯坦卢比 癌症 腺癌 基因表达
作者
Sihan Chen,Guodong Cao,Wei Wu,Lu Yida,Xiaobo He,Lei Yang,Ke Chen,Bo Chen,Maoming Xiong
出处
期刊:Bioscience Reports [Portland Press]
卷期号:40 (8) 被引量:6
标识
DOI:10.1042/bsr20201427
摘要

Colon adenocarcinoma (COAD) is a malignant gastrointestinal tumor, often occurring in the left colon, which is regulated by glycolysis-related processes. In past studies, multiple genes that influence the prognosis for survival have been discovered through bioinformatics analysis. However, the prediction of disease prognosis using a single gene is not an accurate method. In the present study, a mechanistic model was established to achieve better prediction for the prognosis of COAD. COAD-related data downloaded from The Cancer Genome Atlas (TCGA) were correlated with the glycolysis process using gene set enrichment analysis (GSEA) to determine the glycolysis-related genes that regulate COAD. Using COX regression analysis, glycolysis-related genes associated with the prognosis of COAD were identified, and the genes screened to establish a predictive model. The risk scores of this model were correlated with relevant clinical data to obtain a connection diagram between the model and survival rate, tumor characteristic data, etc. Finally, genes in the model were correlated with cells in the tumor microenvironment, finding that they affected specific immune cells in the model. Seven genes related to glycolysis were identified (PPARGC1A, DLAT, 6PC2, P4HA1, STC2, ANKZF1, and GPC1), which affect the prognosis of patients with COAD and constitute the model for prediction of survival of COAD patients.
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