BUGSnet: an R package to facilitate the conduct and reporting of Bayesian network Meta-analyses

计算机科学 贝叶斯概率 不错 推论 贝叶斯网络 吉布斯抽样 数据挖掘 数据科学 机器学习 运筹学 人工智能 数学 程序设计语言
作者
Audrey Béliveau,Devon J. Boyne,Justin Slater,Darren R. Brenner,Paul Arora
出处
期刊:BMC Medical Research Methodology [BioMed Central]
卷期号:19 (1) 被引量:230
标识
DOI:10.1186/s12874-019-0829-2
摘要

Abstract Background Several reviews have noted shortcomings regarding the quality and reporting of network meta-analyses (NMAs). We suspect that this issue may be partially attributable to limitations in current NMA software which do not readily produce all of the output needed to satisfy current guidelines. Results To better facilitate the conduct and reporting of NMAs, we have created an R package called “BUGSnet” ( B ayesian inference U sing G ibbs S ampling to conduct a Net work meta-analysis). This R package relies upon Just Another Gibbs Sampler (JAGS) to conduct Bayesian NMA using a generalized linear model. BUGSnet contains a suite of functions that can be used to describe the evidence network, estimate a model and assess the model fit and convergence, assess the presence of heterogeneity and inconsistency, and output the results in a variety of formats including league tables and surface under the cumulative rank curve (SUCRA) plots. We provide a demonstration of the functions contained within BUGSnet by recreating a Bayesian NMA found in the second technical support document composed by the National Institute for Health and Care Excellence Decision Support Unit (NICE-DSU). We have also mapped these functions to checklist items within current reporting and best practice guidelines. Conclusion BUGSnet is a new R package that can be used to conduct a Bayesian NMA and produce all of the necessary output needed to satisfy current scientific and regulatory standards. We hope that this software will help to improve the conduct and reporting of NMAs.
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