亲爱的研友该休息了!由于当前在线用户较少,发布求助请尽量完整地填写文献信息,科研通机器人24小时在线,伴您度过漫漫科研夜!身体可是革命的本钱,早点休息,好梦!

Role of Necroptosis and Immune Infiltration in Human Stanford Type A Aortic Dissection: Novel Insights from Bioinformatics Analyses

坏死性下垂 小桶 生物 基因 基因表达谱 基因表达 微阵列分析技术 免疫系统 微阵列 计算生物学 转录组 生物信息学 程序性细胞死亡 遗传学 细胞凋亡
作者
Fuqiang Liu,Tao Wei,Lin Liu,Fangxia Hou,Cuixiang Xu,Hua Guo,Wei Zhang,Meijuan Ma,Yulian Zhang,Qi Yu,Junkui Wang
出处
期刊:Oxidative Medicine and Cellular Longevity [Hindawi Publishing Corporation]
卷期号:2022: 1-18 被引量:30
标识
DOI:10.1155/2022/6184802
摘要

Background. Stanford type A aortic dissection (TAAD) is one of the most life-threatening cardiovascular emergencies with high mortality and morbidity, and necroptosis is a newly identified type of programmed cell death and contributes to the pathogenesis of various cardiovascular diseases. However, the role of necroptosis in TAAD has not been elucidated. This study was aimed at determining the role of necroptosis in TAAD using bioinformatics analyses. Methods. The RNA sequencing dataset GSE153434 and the microarray dataset GSE52093 were obtained from Gene Expression Omnibus (GEO) database. Differentially expressed genes of necroptosis (NRDEGs) were identified based on differentially expressed genes (DEGs) and necroptosis gene set. Gene set enrichment analysis (GSEA) was applied to evaluate the gene enrichment signaling pathway in TAAD. The STRING database and Cytoscape software were used to establish and visualize protein-protein interaction (PPI) networks and identify the key functional modules of NRDEGs. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses of NRDEGs were also performed. Additionally, Spearman correlations were used to construct the necroptosis-related transcription factor-target genes regulatory network, immune infiltration patterns were analyzed using the ImmuCellAI algorithm, and the correlation between immune cell-type abundance and NRDEGs expression was investigated. The expression levels of NRDEGs and immune infiltration were additionally verified in the GSE52093 dataset. Results. We found that the necroptosis pathway was considerably enriched and activated in TAAD samples. Overall, 25 NRDEGs were identified including MLKL, RIPK1, and FADD, and among them, 18 were verified in the validation set. Moreover, GO and KEGG enrichment analyses found that NRDEGs were primarily involved in the tumor necrosis factor signaling pathway, nucleotide-binding oligomerization domain-like receptor signaling pathway, and interleukin-17 signaling pathway. The imbalance of Th17/Treg cells was identified in the TAAD samples. Furthermore, correlation analysis indicated that expression of NRDEGs was positively associated with proinflammatory immune-cell infiltrations and negatively associated with anti-inflammatory or regulatory immune-cell infiltrations. Conclusions. The present findings suggest that necroptosis phenomenon exists in TAAD and correlates with immune cell infiltration, which indicate necroptosis may promote the development of TAAD through activating immune infiltration and immune response. This study paves a new road to future investigation of the pathogenic mechanisms and therapeutic strategies for TAAD.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
3秒前
杰尼龟006发布了新的文献求助10
9秒前
深情的朝雪完成签到,获得积分10
25秒前
隐形大地完成签到,获得积分10
54秒前
59秒前
1分钟前
地球发布了新的文献求助10
1分钟前
地球完成签到,获得积分10
1分钟前
闪闪的雪卉完成签到,获得积分10
1分钟前
科研通AI2S应助科研通管家采纳,获得10
1分钟前
1分钟前
1分钟前
阿巴巴巴吧完成签到,获得积分10
2分钟前
蛙蛙完成签到 ,获得积分10
2分钟前
无心的月光完成签到,获得积分10
2分钟前
彭晓雅完成签到,获得积分10
2分钟前
2分钟前
光亮豌豆完成签到,获得积分10
2分钟前
3分钟前
田様应助杰尼龟006采纳,获得10
3分钟前
3分钟前
杰尼龟006发布了新的文献求助10
3分钟前
Willow完成签到,获得积分10
3分钟前
留胡子的丹亦完成签到,获得积分10
4分钟前
吐丝麵包完成签到 ,获得积分10
4分钟前
xiaoma完成签到,获得积分10
4分钟前
4分钟前
4分钟前
单薄的钥匙完成签到,获得积分10
4分钟前
5分钟前
徐公完成签到 ,获得积分10
5分钟前
可爱的新儿完成签到,获得积分10
6分钟前
genomed应助聪明纲采纳,获得10
6分钟前
Orange应助Omni采纳,获得10
6分钟前
怡然碧空完成签到,获得积分10
6分钟前
zzz完成签到 ,获得积分10
7分钟前
高大山兰完成签到,获得积分10
7分钟前
8分钟前
杰尼龟006发布了新的文献求助10
8分钟前
Raunio完成签到,获得积分10
8分钟前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
Introduction to Helicopter and Tiltrotor Flight Simulation, Second Edition 2500
Developing Genetic Editing Tools for Lysobacter 2000
卤化钙钛矿人工突触的研究 2000
Моделирование процессов самоорганизации в кристаллообразующих системах 1000
History of U.S. Space Surveillance and Satellite Cataloging 1000
Malcolm Fraser : a biography 700
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 物理 内科学 复合材料 催化作用 物理化学 光电子学 电极 细胞生物学 基因 无机化学
热门帖子
关注 科研通微信公众号,转发送积分 6512209
求助须知:如何正确求助?哪些是违规求助? 8305658
关于积分的说明 17741257
捐赠科研通 5613753
什么是DOI,文献DOI怎么找? 2923715
邀请新用户注册赠送积分活动 1900907
关于科研通互助平台的介绍 1762652