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Structures and gene clusters of the O-antigens of Escherichia albertii O3, O4, O6, and O7

大肠杆菌 化学 基因 抗原 拉伤 乙酰化 结晶学 生物化学 立体化学 遗传学 生物 解剖
作者
Olesya I. Naumenko,Han Zheng,Sof’ya N. Senchenkova,Hong Wang,Qun Li,Alexander S. Shashkov,Jianping Wang,Yuriy A. Knirel,Yanwen Xiong
出处
期刊:Carbohydrate Research [Elsevier BV]
卷期号:449: 17-22 被引量:14
标识
DOI:10.1016/j.carres.2017.06.008
摘要

The O-specific polysaccharides (OPSs) called O-antigens were obtained by mild acid degradation of the lipopolysaccharides of Escherichia albertii serotypes O3, O4, O6, and O7 and studied by sugar analysis along with 1D and 2D 1H and 13C NMR spectroscopy. The following structure was established for the OPS of E. albertii O4, which, to our knowledge, is unique among known bacterial polysaccharide structures: →2)-α-l-Rhap-(1 → 2)-α-l-Fucp-(1 → 2)-β-d-Galp-(1 → 3)-α-d-GalpNAc-(1 → 3)-β-d-GlcpNAc-(1→ The OPS structure of the strain of E. albertii O7 studied was identical to that of strain LMG 20973 (= Albert 10457), whose structure has been reported earlier (R. Eserstam et al. Eur. J. Biochem. 269 (2002) 3289–3295). E. albertii O3 and O6 shared the OPS structures with Escherichia coli O181 and O3, respectively, except for the lack of O-acetylation in E. albertii O3, which is present in E. coli O181. The gene clusters driving the O-antigen biosynthesis of the E. albertii strains were sequenced, the genes were annotated by comparison with sequences in the available databases, and the predicted functions of the encoded proteins were found to be consistent with the OPS structures established. In accordance with the relatedness of the OPS structures, the O-antigen gene clusters of E. albertii O3 and O6 contain the same genes and have the same organization as those of E. coli O181 and O3, the entire gene clusters being 83% and 98% identical, respectively.

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