单核苷酸多态性
全基因组关联研究
表达数量性状基因座
遗传关联
生物
双胞胎研究
插补(统计学)
遗传学
SNP公司
基因
遗传力
基因型
机器学习
缺少数据
计算机科学
作者
Jia Luo,Tianhao Zhang,Weijing Wang,Dongfeng Zhang
标识
DOI:10.1080/03008207.2022.2104160
摘要
Purpose Currently, new loci related to handgrip strength have been identified in genome-wide association studies. However, this topic is an understudied area in the Chinese population.Materials and Methods A total of 135 dizygotic twin pairs recruited from the Qingdao Twin Registry system were included in the present study. Using GEMMA, VEAGSE2, and PASCAL software for SNP-based analysis, gene-based analysis, and pathway-based analysis, respectively. The resulting SNPs were subjected to eQTL analysis.Results Although none of the loci reach the statistically significant level (p < 5 × 10−8), we found 19 SNPs exceeding the suggestive significant level (p < 1 × 10−5). After imputation, 162 SNPs reached suggestive evidence level for handgrip strength. A total of 1,118 genes reached the nominal significance level (p < 0.05) in gene-based analysis. A total of 626 potential biological pathways were associated with handgrip strength (p < 0.05). The results of eQTL analysis were mainly enriched in tissues such as the muscle-skeletal, brain, visceral fat, and brain-cortical.Conclusions Genetic variants may involve in regulatory domains, functional genes, and biological pathways that mediate handgrip strength.
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