Predictive modeling of mortality in carbapenem-resistant Acinetobacter baumannii bloodstream infections using machine learning

鲍曼不动杆菌 医学 粘菌素 碳青霉烯 重症监护医学 败血症 死亡率 抗药性 替加环素 抗生素 内科学 微生物学 生物 铜绿假单胞菌 细菌 遗传学
作者
Murat Özdede,Pınar Zarakolu,Gökhan Metan,Özgen Köseoğlu Eser,Cemile Selimova,Canan Kızılkaya,Ferhan Elmalı,Murat Akova
出处
期刊:Journal of Investigative Medicine [BMJ]
卷期号:72 (7): 684-696 被引量:2
标识
DOI:10.1177/10815589241258964
摘要

Acinetobacter baumannii, a notable drug-resistant bacterium, often induces severe infections in healthcare settings, prompting a deeper exploration of treatment alternatives due to escalating carbapenem resistance. This study meticulously examined clinical, microbiological, and molecular aspects related to in-hospital mortality in patients with carbapenem-resistant A. baumannii (CRAB) bloodstream infections (BSIs). From 292 isolates, 153 cases were scrutinized, reidentified through matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF-MS), and evaluated for antimicrobial susceptibility and carbapenemase genes via multiplex polymerase chain reaction (PCR). Utilizing supervised machine learning, the study constructed models to predict 14- and 30-day mortality rates, revealing the Naïve Bayes model’s superior specificity (0.75) and area under the curve (0.822) for 14-day mortality, and the Random Forest model’s impressive recall (0.85) for 30-day mortality. These models delineated eight and nine significant features for 14- and 30-day mortality predictions, respectively, with “septic shock” as a pivotal variable. Additional variables such as neutropenia with neutropenic days prior to sepsis, mechanical ventilator support, chronic kidney disease, and heart failure were also identified as ranking features. However, empirical antibiotic therapy appropriateness and specific microbiological data had minimal predictive efficacy. This research offers foundational data for assessing mortality risks associated with CRAB BSI and underscores the importance of stringent infection control practices in the wake of the scarcity of new effective antibiotics against resistant strains. The advanced models and insights generated in this study serve as significant resources for managing the repercussions of A. baumannii infections, contributing substantially to the clinical understanding and management of such infections in healthcare environments.
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