Determination of phase diagrams via computer simulation: methodology and applications to water, electrolytes and proteins

相图 冰Ih 统计物理学 固溶体 相(物质) 计算 水模型 Crystal(编程语言) 热力学 硬球 材料科学 物理 化学 分子动力学 计算机科学 分子 计算化学 算法 量子力学 冶金 程序设计语言
作者
Carlos Vega,Eduardo Sanz,J. L. F. Abascal,Eva G. Noya
出处
期刊:Journal of Physics: Condensed Matter [IOP Publishing]
卷期号:20 (15): 153101-153101 被引量:199
标识
DOI:10.1088/0953-8984/20/15/153101
摘要

In this review we focus on the determination of phase diagrams by computer simulation, with particular attention to the fluid–solid and solid–solid equilibria. The methodology to compute the free energy of solid phases will be discussed. In particular, the Einstein crystal and Einstein molecule methodologies are described in a comprehensive way. It is shown that both methodologies yield the same free energies and that free energies of solid phases present noticeable finite size effects. In fact, this is the case for hard spheres in the solid phase. Finite size corrections can be introduced, although in an approximate way, to correct for the dependence of the free energy on the size of the system. The computation of free energies of solid phases can be extended to molecular fluids. The procedure to compute free energies of solid phases of water (ices) will be described in detail. The free energies of ices Ih, II, III, IV, V, VI, VII, VIII, IX, XI and XII will be presented for the SPC/E and TIP4P models of water. Initial coexistence points leading to the determination of the phase diagram of water for these two models will be provided. Other methods to estimate the melting point of a solid, such as the direct fluid–solid coexistence or simulations of the free surface of the solid, will be discussed. It will be shown that the melting points of ice Ih for several water models, obtained from free energy calculations, direct coexistence simulations and free surface simulations agree within their statistical uncertainty. Phase diagram calculations can indeed help to improve potential models of molecular fluids. For instance, for water, the potential model TIP4P/2005 can be regarded as an improved version of TIP4P. Here we will review some recent work on the phase diagram of the simplest ionic model, the restricted primitive model. Although originally devised to describe ionic liquids, the model is becoming quite popular to describe the behavior of charged colloids. Moreover, the possibility of obtaining fluid–solid equilibria for simple protein models will be discussed. In these primitive models, the protein is described by a spherical potential with certain anisotropic bonding sites (patchy sites).
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
更新
大幅提高文件上传限制,最高150M (2024-4-1)

科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
热情的乐枫完成签到 ,获得积分10
1秒前
5秒前
8秒前
9秒前
10秒前
鲸鲸~完成签到,获得积分20
12秒前
13秒前
kankan发布了新的文献求助10
13秒前
tiantian8715完成签到,获得积分20
13秒前
cxZ发布了新的文献求助10
14秒前
了晨发布了新的文献求助10
17秒前
20秒前
青苔完成签到,获得积分10
20秒前
陈奈何完成签到 ,获得积分10
21秒前
酷波er应助捧花的人采纳,获得10
21秒前
欢呼的寻双完成签到,获得积分20
26秒前
沉默的觅云完成签到 ,获得积分10
29秒前
深情安青应助张三采纳,获得10
30秒前
33秒前
虚幻忆南完成签到,获得积分10
34秒前
浮尘应助闪电小子采纳,获得10
36秒前
37秒前
37秒前
田様应助ls1260798887采纳,获得10
38秒前
马浩瑜发布了新的文献求助10
39秒前
张三发布了新的文献求助10
42秒前
Singularity举报温水煮青蛙求助涉嫌违规
45秒前
zpctx完成签到,获得积分10
45秒前
45秒前
46秒前
octopus发布了新的文献求助10
49秒前
zpctx发布了新的文献求助10
52秒前
53秒前
椿和关注了科研通微信公众号
54秒前
桃桃完成签到,获得积分10
55秒前
Owen应助高大的金鱼采纳,获得10
56秒前
57秒前
热切菩萨应助jam采纳,获得10
57秒前
哈哈完成签到 ,获得积分20
58秒前
苗冬完成签到,获得积分10
59秒前
高分求助中
请在求助之前详细阅读求助说明!!!! 20000
One Man Talking: Selected Essays of Shao Xunmei, 1929–1939 1000
The Three Stars Each: The Astrolabes and Related Texts 900
Yuwu Song, Biographical Dictionary of the People's Republic of China 800
Multifunctional Agriculture, A New Paradigm for European Agriculture and Rural Development 600
Bernd Ziesemer - Maos deutscher Topagent: Wie China die Bundesrepublik eroberte 500
A radiographic standard of reference for the growing knee 400
热门求助领域 (近24小时)
化学 材料科学 医学 生物 有机化学 工程类 生物化学 纳米技术 物理 内科学 计算机科学 化学工程 复合材料 遗传学 基因 物理化学 催化作用 电极 光电子学 量子力学
热门帖子
关注 科研通微信公众号,转发送积分 2476750
求助须知:如何正确求助?哪些是违规求助? 2140719
关于积分的说明 5456186
捐赠科研通 1864073
什么是DOI,文献DOI怎么找? 926658
版权声明 562846
科研通“疑难数据库(出版商)”最低求助积分说明 495803