Rapid Zebrafish Behavioral Profiling Assay Accelerates the Identification of Environmental Neurodevelopmental Toxicants

斑马鱼 生物 计算生物学 仿形(计算机编程) 生物信息学 计算机科学 遗传学 基因 操作系统
作者
Kun Zhang,Jiahui Liang,Nadja R. Brun,Yanbin Zhao,Andreas A. Werdich
出处
期刊:Environmental Science & Technology [American Chemical Society]
卷期号:55 (3): 1919-1929 被引量:30
标识
DOI:10.1021/acs.est.0c06949
摘要

Rapid and cost-effective in vivo assays to screen potential environmental neurodevelopmental toxicants are necessary to address the limitations of in vitro platforms, such as the inability to fully recapitulate the developmental and physiological processes of whole organisms. In the present study, a rapid zebrafish behavioral profiling assay was developed to characterize the neurodevelopmental effects of environmental substances by quantitatively evaluating multiple spontaneous movement features of zebrafish embryos. This video analysis-based assay automatically segmented every embryo and thus was able to accurately quantify spontaneous movement features, including frequency, duration, intensity, interval, and the number of continuous movements. When tested with eight environmental substances known to be neurodevelopmental toxicants, such as chlorpyrifos and bisphenol A, the assay successfully captured frequency alterations that were well-documented in previous studies while also providing additional information. Using an optimized procedure, we further assessed 132 potential neurotoxins that spanned a wide range of molecular targets, many of which were previously detected in environmental waterbodies. The distinct altered behavioral barcodes indicated that the spontaneous movement was impacted by diverse neuroactive substances, and the effects could be effectively evaluated with the developed assay. The web-based tool, named EMAnalysis, is further provided at http://www.envh.sjtu.edu.cn/zebrafish_contraction.jsp. Thus, this assay provides an efficient platform to accelerate the pace of neurotoxic environmental contaminant discoveries.

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
刚刚
乐乐应助科研顺采纳,获得10
1秒前
小马甲应助小鱼采纳,获得10
1秒前
程程完成签到,获得积分10
2秒前
钰钧发布了新的文献求助30
2秒前
桃子爱学习完成签到,获得积分10
3秒前
MrZ1发布了新的文献求助10
4秒前
清脆的帆布鞋完成签到,获得积分10
5秒前
5秒前
xxxxh发布了新的文献求助10
5秒前
Coke完成签到,获得积分10
6秒前
万能图书馆应助隗思睿采纳,获得10
8秒前
8秒前
8秒前
jigds完成签到,获得积分10
9秒前
SciGPT应助Hugo采纳,获得10
9秒前
9秒前
10秒前
11秒前
wsj完成签到 ,获得积分10
11秒前
molihuakai应助cardioJA采纳,获得10
11秒前
于吉武完成签到,获得积分10
12秒前
12秒前
13秒前
13秒前
Meima完成签到,获得积分10
15秒前
16秒前
16秒前
17秒前
科研通AI6.4应助格拉希尔采纳,获得10
17秒前
18秒前
神勇从波发布了新的文献求助10
19秒前
芸遥发布了新的文献求助10
19秒前
19秒前
hhhhh欢完成签到,获得积分20
19秒前
Hugo完成签到,获得积分10
19秒前
20秒前
20秒前
借一颗糖发布了新的文献求助30
21秒前
21秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
内視鏡的に摘除しえた十二指腸乳頭部腫瘍の2例 660
On nonlinear stability of contact discontinuities. In: Hyperbolic problems: theory, numerics, applications (Stony Brook, NY, 1994) 510
Management and the Arts 510
Matrix Methods in Data Mining and Pattern Recognition Second Edition 510
微电子器件实验教程 400
The Neuroscience of Language 400
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 内科学 物理 复合材料 催化作用 细胞生物学 无机化学 光电子学 物理化学 电极 基因
热门帖子
关注 科研通微信公众号,转发送积分 7678463
求助须知:如何正确求助?哪些是违规求助? 9243740
关于积分的说明 19925286
捐赠科研通 7249312
什么是DOI,文献DOI怎么找? 3287105
关于科研通互助平台的介绍 2444931
邀请新用户注册赠送积分活动 2290313