Identification of Immune-Linked Hub Genes and Diagnostic Model Construction in Schizophrenia

免疫系统 生物 CD8型 基因 免疫学 遗传学
作者
Kjersti Lian,Zonglin Shen,Runxu Yang,Jing Ye,Binli Shang,Dong Liu,Hongfang Li,Jiabing Wu,Yuqi Cheng,Xiufeng Xu
出处
期刊:Journal of Molecular Neuroscience [Springer Science+Business Media]
卷期号:73 (7-8): 635-648
标识
DOI:10.1007/s12031-023-02138-7
摘要

Abstract Schizophrenia (SCZ) is a prevalent, severe, and persistent mental disorder with an unknown etiology. Growing evidence indicates that immunological dysfunction is vital in the development of SCZ. Our study aims to uncover potential immune-linked hub genes and immune infiltration characteristics of SCZ, as well as to develop a diagnostic model based on immune-linked central genes. GSE38484 and GSE54913 chip expression data for patients with SCZ and healthy controls were retrieved. Weighted gene co-expression network analysis (WGCNA) was performed to identify major module genes and critical immune-linked genes. Functional enrichment analysis was conducted to elucidate the involvement of key genes in the immunological response to SCZ, along with the examination of their protein interactions. Moreover, 202 peripheral blood samples were examined using the single-sample gene set enrichment analysis (ssGSEA) method to detect distinct immune cell types. Hub immune-linked genes in SCZ were identified using the minimal absolute contraction and selection operator analysis. Receptor profiles of central immune-linked genes were analyzed to distinguish the two groups. Finally, the association between immune-linked hub genes and various types of immune cells was assessed. Our findings revealed ten immune cell types and nine key genes involved in SCZ, including effector memory CD4+ T cells, activated CD8+ T cells, mast cells, naive CD8+ T cells, PBMC, type 17 helper cells (Th17), central memory CD8+ T cells, CD56 bright NK cells, memory B cells, and regulatory T cells. Diagnostic models constructed using LASSO regression exhibited an average area under the curve (AUC) of 0.866. Our results indicate immunological dysfunction as a factor in the development of SCZ. ASGR2 , ADRM1 , AHANK , S100A8 , FUCA1 , AKNA , GATA3 , AHCYL2 , and PTRH2 are the key regulatory genes of immune cells, highlighting their potential as novel therapeutic targets for SCZ.

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
unicorn完成签到,获得积分10
1秒前
汉堡包应助烂漫冰烟采纳,获得10
1秒前
lxh发布了新的文献求助10
1秒前
1秒前
菌菌完成签到,获得积分10
2秒前
3秒前
4秒前
Lucas应助怡然的凌兰采纳,获得10
6秒前
欣慰万怨发布了新的文献求助10
7秒前
8秒前
Lucas应助娇气的涵柏采纳,获得10
8秒前
non发布了新的文献求助10
8秒前
8秒前
聪慧的稀完成签到,获得积分20
9秒前
Guo应助智慧金刚采纳,获得10
9秒前
10秒前
11秒前
岁月轮回发布了新的文献求助10
11秒前
烂漫冰烟发布了新的文献求助10
12秒前
小二郎应助su采纳,获得10
12秒前
13秒前
缨绒发布了新的文献求助10
14秒前
14秒前
华仔应助沧海一兰采纳,获得10
14秒前
愉快的戎完成签到,获得积分10
15秒前
Y神完成签到 ,获得积分10
15秒前
16秒前
CEN完成签到,获得积分10
16秒前
17秒前
FuTing完成签到,获得积分10
18秒前
18秒前
欣欣杨完成签到,获得积分10
19秒前
19秒前
袁初南完成签到,获得积分10
19秒前
曾曾完成签到,获得积分10
19秒前
19秒前
sdd完成签到,获得积分10
20秒前
科研通AI2S应助鲁班大神采纳,获得30
22秒前
浩浩好好发布了新的文献求助10
24秒前
24秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
Les Mantodea de Guyane Insecta, Polyneoptera 2000
Leading Academic-Practice Partnerships in Nursing and Healthcare: A Paradigm for Change 800
Signals, Systems, and Signal Processing 610
Research Methods for Business: A Skill Building Approach, 9th Edition 500
Research Methods for Applied Linguistics 500
Picture Books with Same-sex Parented Families Unintentional Censorship 444
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 物理 内科学 复合材料 催化作用 物理化学 光电子学 电极 细胞生物学 基因 无机化学
热门帖子
关注 科研通微信公众号,转发送积分 6412892
求助须知:如何正确求助?哪些是违规求助? 8231911
关于积分的说明 17472158
捐赠科研通 5465642
什么是DOI,文献DOI怎么找? 2887833
邀请新用户注册赠送积分活动 1864576
关于科研通互助平台的介绍 1703021