邻接表
胶质母细胞瘤
磁共振成像
无线电技术
表型
生物标志物
空间异质性
计算生物学
计算机科学
生物
医学
人工智能
放射科
癌症研究
基因
生态学
遗传学
算法
作者
Xuan Xu,Dimitris Samaras,Prateek Prasanna
标识
DOI:10.1109/embc46164.2021.9629779
摘要
Intratumor heterogeneity in glioblastoma (GBM) has been linked to adverse clinical outcomes including poor survival and sub-optimal response to therapies. Different techniques, such as radiomics, have been used to characterize GBM phenotype. However, the spatial diversity and the interaction between different sub-regions within the tumor (habitats) and its microenvironment has been relatively unexplored. Besides, existing approaches have mainly focused on the radiomic analysis within globally defined regions without considering local heterogeneity. In this paper, we developed a 3D spatial co-localization descriptor based on the adjacency of "habitats" to quantify the diversity of physiologically similar sub-regions on multi-protocol magnetic resonance imaging. We demonstrated the utility of this spatial phenotype descriptor in predicting overall patient survival. Our experimental results on N=236 treatment-naïve MRI scans suggest that the co-localization features in conjunction with traditional clinical measures, such as age and tumor volume, outperform texture based radiomic features. The presented descriptor provides a tool for more complete characterization of intratumor heterogeneity in solid cancers.
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