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5′ UTR CGG repeat expansion in GIPC1 is associated with oculopharyngodistal myopathy

三核苷酸重复扩增 遗传学 系谱图 肌病 生物 单倍型 基因 基因型 等位基因
作者
Jianying Xi,Xilu Wang,Dongyue Yue,Tonghai Dou,Qunfeng Wu,Jun Lu,Yi-Qi Liu,Wenbo Yu,Kai Qiao,Jie Lin,Sushan Luo,Jing Li,Ailian Du,Jinqiao Dong,Yan Chen,Lijun Luo,Jie Yang,Zhenmin Niu,Zonghui Liang,Chongbo Zhao,Jiahong Lu,Wenhua Zhu,Yan Zhou
出处
期刊:Brain [Oxford University Press]
卷期号:144 (2): 601-614 被引量:39
标识
DOI:10.1093/brain/awaa426
摘要

Abstract Oculopharyngodistal myopathy is a late-onset degenerative muscle disorder characterized by ptosis and weakness of the facial, pharyngeal, and distal limb muscles. A recent report suggested a non-coding trinucleotide repeat expansion in LRP12 to be associated with the disease. Here we report a genetic study in a Chinese cohort of 41 patients with the clinical diagnosis of oculopharyngodistal myopathy (21 cases from seven families and 20 sporadic cases). In a large family with 12 affected individuals, combined haplotype and linkage analysis revealed a maximum two-point logarithm of the odds (LOD) score of 3.3 in chromosomal region chr19p13.11-p13.2 and narrowed the candidate region to an interval of 4.5 Mb. Using a comprehensive strategy combining whole-exome sequencing, long-read sequencing, repeat-primed polymerase chain reaction and GC-rich polymerase chain reaction, we identified an abnormal CGG repeat expansion in the 5′ UTR of the GIPC1 gene that co-segregated with disease. Overall, the repeat expansion in GIPC1 was identified in 51.9% independent pedigrees (4/7 families and 10/20 sporadic cases), while the repeat expansion in LRP12 was only identified in one sporadic case (3.7%) in our cohort. The number of CGG repeats was <30 in controls but >60 in affected individuals. There was a slight correlation between repeat size and the age at onset. Both repeat expansion and retraction were observed during transmission but somatic instability was not evident. These results further support that non-coding CGG repeat expansion plays an essential role in the pathogenesis of oculopharyngodistal myopathy.
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