In comparison to the vastly studied intestinal microbiome, studies regarding the lung microbiome are still in an incipient stage. The lower respiratory tract has historically been considered „sterile”, mainly due to the dificulties to grow lung microorganisms în routine microbiological cultures from healthy subjects. This dogma has progresively been contested once advanced sequencing techniques were able to detect microbial DNA at a pulmonary level even in the lungs of healthy individuals. An analysis of the possible interactions between the respiratory tract and the intestinal one through microbiota represents a new frontier in research. The generally accepted fact that diet is the main influencing factor of the intestinal microbiome extends the understanding of the effects of the intestinal microbiota on respiratory health via diet, and offers a promising perspective for developing nutritional therapeutic strategies as complement to pneumological therapy.