Predictive Clinical Neuroscience Portal (PCNportal): instant online access to research-grade normative models for clinical neuroscientists.

即时 规范性 预测编码 认知科学 心理学 计算机科学 计算神经科学 临床神经科学 神经科学 生物 社会学 认识论 社会科学 哲学 编码(社会科学) 食品科学 神经学
作者
Pieter Barkema,Saige Rutherford,Hurng-Chun Lee,Seyed Mostafa Kia,Hannah S. Savage,Christian F. Beckmann,André F. Marquand
出处
期刊:Wellcome open research [Wellcome]
卷期号:8: 326-326 被引量:11
标识
DOI:10.12688/wellcomeopenres.19591.1
摘要

Background: The neurobiology of mental disorders remains poorly understood despite substantial scientific efforts, due to large clinical heterogeneity and to a lack of tools suitable to map individual variability. Normative modeling is one recently successful framework that can address these problems by comparing individuals to a reference population. The methodological underpinnings of normative modelling are, however, relatively complex and computationally expensive. Our research group has developed the python-based normative modelling package Predictive Clinical Neuroscience toolkit (PCNtoolkit) which provides access to many validated algorithms for normative modelling. PCNtoolkit has since proven to be a strong foundation for large scale normative modelling, but still requires significant computation power, time and technical expertise to develop. Methods: To address these problems, we introduce PCNportal. PCNportal is an online platform integrated with PCNtoolkit that offers access to pre-trained research-grade normative models estimated on tens of thousands of participants, without the need for computation power or programming abilities. PCNportal is an easy-to-use web interface that is highly scalable to large user bases as necessary. Finally, we demonstrate how the resulting normalized deviation scores can be used in a clinical application through a schizophrenia classification task applied to cortical thickness and volumetric data from the longitudinal Northwestern University Schizophrenia Data and Software Tool (NUSDAST) dataset. Results: At each longitudinal timepoint, the transferred normative models achieved a mean[std. dev.] explained variance of 9.4[8.8]%, 9.2[9.2]%, 5.6[7.4]% respectively in the control group and 4.7[5.5]%, 6.0[6.2]%, 4.2[6.9]% in the schizophrenia group. Diagnostic classifiers achieved AUC of 0.78, 0.76 and 0.71 respectively. Conclusions: This replicates the utility of normative models for diagnostic classification of schizophrenia and showcases the use of PCNportal for clinical neuroimaging. By facilitating and speeding up research with high-quality normative models, this work contributes to research in inter-individual variability, clinical heterogeneity and precision medicine.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
LLLLL发布了新的文献求助30
刚刚
刚刚
cc发布了新的文献求助10
1秒前
2秒前
杨欢欢发布了新的文献求助10
3秒前
自由马儿发布了新的文献求助10
3秒前
3秒前
单纯大侠完成签到 ,获得积分10
5秒前
summer完成签到 ,获得积分10
5秒前
今后应助安芳采纳,获得10
5秒前
叶艳完成签到 ,获得积分10
6秒前
6秒前
6秒前
7秒前
quanna发布了新的文献求助10
7秒前
8秒前
小徐完成签到 ,获得积分10
9秒前
dfghjkl完成签到,获得积分10
9秒前
LZ发布了新的文献求助10
10秒前
夜星寒月发布了新的文献求助10
10秒前
帅哥吴克完成签到,获得积分10
11秒前
11秒前
Lucas应助卡尔采纳,获得10
11秒前
berg发布了新的文献求助10
12秒前
FashionBoy应助HuangJunfei采纳,获得10
12秒前
12秒前
dfghjkl发布了新的文献求助10
13秒前
linqi发布了新的文献求助10
13秒前
14秒前
自来也发布了新的文献求助10
15秒前
科研通AI6.2应助七听采纳,获得30
16秒前
ABC完成签到,获得积分10
17秒前
绿洲给了沙漠完成签到 ,获得积分10
17秒前
共享精神应助氯化氟采纳,获得10
17秒前
烟花应助cai采纳,获得10
17秒前
Felicity发布了新的文献求助10
18秒前
HJJHJH发布了新的文献求助10
19秒前
19秒前
Devin Irving发布了新的文献求助10
20秒前
21秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
A Study of the Model by which Principals’ Leadership Behaviour Influences Student Learning Outcomes in Elementary Schools 1000
Principles of town planning: translating concepts to applications 1000
Management and the Arts 510
Matrix Methods in Data Mining and Pattern Recognition Second Edition 510
核安全综合知识2024版 500
Photothermal Science and Techniques 500
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 内科学 物理 复合材料 催化作用 细胞生物学 无机化学 光电子学 物理化学 电极 基因
热门帖子
关注 科研通微信公众号,转发送积分 7710548
求助须知:如何正确求助?哪些是违规求助? 9267256
关于积分的说明 20064213
捐赠科研通 7286746
什么是DOI,文献DOI怎么找? 3296952
关于科研通互助平台的介绍 2451488
邀请新用户注册赠送积分活动 2304019