Quantitative Proteomics and Phosphoproteomics Analyses Identify Sex-biased Protein Ontologies of Schistosoma Japonicum

磷酸蛋白质组学 蛋白质组学 生物 蛋白质组 激酶 定量蛋白质组学 计算生物学 磷酸化 基诺美 鉴定(生物学) 细胞生物学 核糖核酸 功能(生物学) 日本血吸虫 蛋白质磷酸化 UniProt公司 信号转导 生物信息学 转录组 蛋白激酶A 蛋白质生物合成 生物化学
作者
Chuantao Fang,Bikash Ranjan Giri,Guofeng Cheng
出处
期刊:Genomics, Proteomics & Bioinformatics [Elsevier BV]
标识
DOI:10.1093/gpbjnl/qzaf126
摘要

Schistosoma japonicum (S. japonicum) is the causative agent of human schistosomiasis in Asia. Identification of differentially expressed proteins (DEPs) between males and females could elucidate critical signaling pathways underlying sexual maturation and egg production. In the study, quantitative proteome and phosphoproteome profiles were obtained for adult males and females of S. japonicum. In total, we identified 2710 unique proteins, including 2055 proteins and 924 phosphorylated proteins, and 252 (∼ 12.5%) non-phosphorylated and 209 (11.7%) phosphorylated DEPs between males and females. Combined with RNA sequencing, 22 non-phosphorylated DEPs exhibited corresponding mRNA-level changes. Meanwhile, several non-phosphorylated DEPs were shown to function in sex-biased biological processes, including vitellocyte development, oviposition, and parasite mobility by RNA interference. Furthermore, we annotated 96 kinases for S. japonicum, of which CMGC/MAPK and Atypical/RIO kinases are significantly activated in males, while CAMK/CAMKL, AGC/DMPK, and STE/STE7 kinases are activated in females. Finally, the potential drugs targeting these kinases were determined in silico, resulting in 28 kinases as potentially targetable by 30 FDA-approved drugs. Overall, our study provided a collection of evidence-based proteomic and phosphoproteomic resources of S. japonicum and identified sex-biased proteins, phosphopeptides, and kinases, which could serve as potentially effective targets for developing novel interventions against schistosomiasis.

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