An epithelial-mesenchymal transition-related long noncoding RNA signature correlates with the prognosis and progression in patients with bladder cancer.

癌症研究 生物 小RNA 基因敲除 转录组 转移 下调和上调 病理 基因表达 核糖核酸 癌变 肿瘤进展 基因签名 基因表达谱 生物标志物
作者
Hang Tong,Tinghao Li,Shun Gao,Hubin Yin,Honghao Cao,Weiyang He
出处
期刊:Bioscience Reports [Portland Press]
卷期号:41 (1) 被引量:7
标识
DOI:10.1042/bsr20203944
摘要

Bladder cancer is a common malignant tumour worldwide. Epithelial-mesenchymal transition (EMT)-related biomarkers can be used for early diagnosis and prognosis of cancer patients. To explore, accurate prediction models are essential to the diagnosis and treatment for bladder cancer. In the present study, an EMT-related long noncoding RNA (lncRNA) model was developed to predict the prognosis of patients with bladder cancer. Firstly, the EMT-related lncRNAs were identified by Pearson correlation analysis, and a prognostic EMT-related lncRNA signature was constructed through univariate and multivariate Cox regression analyses. Then, the diagnostic efficacy and the clinically predictive capacity of the signature were assessed. Finally, Gene set enrichment analysis (GSEA) and functional enrichment analysis were carried out with bioinformatics. An EMT-related lncRNA signature consisting of TTC28-AS1, LINC02446, AL662844.4, AC105942.1, AL049840.3, SNHG26, USP30-AS1, PSMB8-AS1, AL031775.1, AC073534.1, U62317.2, C5orf56, AJ271736.1, and AL139385.1 was constructed. The diagnostic efficacy of the signature was evaluated by the time-dependent receiver-operating characteristic (ROC) curves, in which all the values of the area under the ROC (AUC) were more than 0.73. A nomogram established by integrating clinical variables and the risk score confirmed that the signature had a good clinically predict capacity. GSEA analysis revealed that some cancer-related and EMT-related pathways were enriched in high-risk groups, while immune-related pathways were enriched in low-risk groups. Functional enrichment analysis showed that EMT was associated with abundant GO terms or signaling pathways. In short, our research showed that the 14 EMT-related lncRNA signature may predict the prognosis and progression of patients with bladder cancer.

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
hunhun完成签到,获得积分20
2秒前
YouY0123完成签到 ,获得积分10
2秒前
肯德鸭完成签到,获得积分10
6秒前
心随以动完成签到 ,获得积分10
9秒前
呵呵喊我完成签到 ,获得积分10
11秒前
wyg1994完成签到,获得积分10
12秒前
ChatGPT发布了新的文献求助10
12秒前
13秒前
16秒前
H柒柒完成签到 ,获得积分10
17秒前
miaxj完成签到,获得积分10
18秒前
道道sy完成签到,获得积分10
18秒前
阿尼完成签到 ,获得积分10
19秒前
辛菜头完成签到,获得积分10
19秒前
希望可讲述完成签到 ,获得积分10
21秒前
六六发布了新的文献求助10
22秒前
aaron完成签到,获得积分10
23秒前
34101127完成签到,获得积分10
23秒前
lilylwy完成签到 ,获得积分0
29秒前
hhllhh完成签到 ,获得积分10
30秒前
d_fishier完成签到 ,获得积分10
32秒前
ChatGPT发布了新的文献求助10
32秒前
Maud完成签到 ,获得积分10
38秒前
小新完成签到 ,获得积分10
38秒前
端庄小懒虫完成签到,获得积分10
39秒前
高贵曼柔完成签到,获得积分10
42秒前
yellow完成签到,获得积分10
42秒前
ZL完成签到,获得积分10
43秒前
ChatGPT发布了新的文献求助10
44秒前
WUZY完成签到,获得积分10
45秒前
周雪完成签到 ,获得积分10
46秒前
心灵美的翠完成签到,获得积分10
50秒前
碧蓝丹烟完成签到 ,获得积分10
50秒前
Laser_eyes完成签到,获得积分10
58秒前
ChatGPT发布了新的文献求助10
59秒前
风信子完成签到,获得积分10
1分钟前
janeeeeeee完成签到,获得积分10
1分钟前
1分钟前
cepha完成签到 ,获得积分10
1分钟前
执着的导师完成签到,获得积分0
1分钟前
高分求助中
Malcolm Fraser : a biography 680
Signals, Systems, and Signal Processing 610
天津市智库成果选编 600
Climate change and sports: Statistics report on climate change and sports 500
Forced degradation and stability indicating LC method for Letrozole: A stress testing guide 500
Organic Reactions Volume 118 400
A Foreign Missionary on the Long March: The Unpublished Memoirs of Arnolis Hayman of the China Inland Mission 400
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 物理 内科学 复合材料 催化作用 物理化学 光电子学 电极 细胞生物学 基因 无机化学
热门帖子
关注 科研通微信公众号,转发送积分 6459107
求助须知:如何正确求助?哪些是违规求助? 8268335
关于积分的说明 17621442
捐赠科研通 5528271
什么是DOI,文献DOI怎么找? 2905885
邀请新用户注册赠送积分活动 1882600
关于科研通互助平台的介绍 1727705