已入深夜,您辛苦了!由于当前在线用户较少,发布求助请尽量完整地填写文献信息,科研通机器人24小时在线,伴您度过漫漫科研夜!祝你早点完成任务,早点休息,好梦!

TP53 Mutation Infers a Poor Prognosis and Is Correlated to Immunocytes Infiltration in Breast Cancer

乳腺癌 渗透(HVAC) 突变 医学 癌症研究 生物 肿瘤科 生物信息学 癌症 遗传学 基因 内科学 地理 气象学
作者
Ziwen Zhang,Hao Ran,Qiusheng Guo,Sheyu Zhang,Xiaojia Wang
出处
期刊:Frontiers in Cell and Developmental Biology [Frontiers Media]
卷期号:9: 759154-759154 被引量:30
标识
DOI:10.3389/fcell.2021.759154
摘要

Background: This study aimed to investigate the TP53 mutation, its potential immune features, its prognostic value, and its impact on immune infiltration in patients with breast cancer (BC). Methods: We downloaded the somatic mutation data and clinicopathologic features of BC patients from the TCGA GDC database, UCSC Xena platform, and International Cancer Genome Consortium (ICGC) database. The association between the TP53 mutation, clinicopathology features, and overall survival (OS) in BC patients was analyzed. We evaluated the potential role of the TP53 mutation in the immune therapy response, including the tumor mutation burden (TMB), microsatellite instability (MSI), and tumor immune dysfunction and exclusion (TIDE). Moreover, ESTIMATE was employed to assess the ImmuneScore and StromalScore in BC patients. We also explored immunocyte infiltration related to the TP53 mutation and its potential mechanism. Immunohistochemistry (IHC) was performed to validate the association between the expression of CXCL1, CXCL10, and CCL20 and TP53 status. Results: We found that the TP53 mutation was significantly associated with the shorter OS ( p = 0.038) and was also an independent predictive factor of OS for BC patients ( p < 0.001). Compared to that in the wild type group, the TP53-mutant group showed a higher TMB value ( P < 0.001), MSI value ( p = 0.077), and TIDE value ( p < 0.001) with respect to BC patient immunotherapy. In addition, the ImmuneScore and StromalScore were both significantly increased in the TP53-mutant group (ImmuneScore: p < 0.001; StromalScore: p = 0.003). The results of CIBERSORT suggested that the TP53 mutation significantly promoted the infiltration of Tregs, T helper cells, and M0-type macrophages. KEGG and GSEA enrichment results suggested that the IL-17 signaling pathway and antigen processing and presentation pathways were significantly enriched in the TP53-mutant group. Importantly, based on IHC results of immune-related hub-genes, the chemokines CXCL1, CXCL10, and CCL20 were significantly upregulated in the TP53-mutant group in BC patients. Conclusion: These results indicate that a TP53 mutation might serve as a biomarker for BC prognosis and is related to immunocyte infiltration in the tumor microenvironment.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
Owen应助cynthia采纳,获得10
1秒前
刘淘淘完成签到 ,获得积分10
3秒前
yuanquaner完成签到,获得积分10
3秒前
贪玩山菡完成签到,获得积分10
3秒前
4秒前
旺仔QQ糖完成签到,获得积分10
5秒前
幸运完成签到,获得积分10
5秒前
单位小孩完成签到,获得积分10
5秒前
6秒前
6秒前
科研通AI6.2应助关宏伟11采纳,获得10
8秒前
11秒前
无花果应助wu采纳,获得10
11秒前
12秒前
ZHJ发布了新的文献求助10
13秒前
14秒前
15秒前
科研通AI6.2应助棉花糖采纳,获得10
16秒前
chaoxcx发布了新的文献求助10
18秒前
曾文慧完成签到 ,获得积分10
18秒前
沉静晓啸完成签到,获得积分10
19秒前
19秒前
852应助关宏伟11采纳,获得10
20秒前
DD完成签到,获得积分20
21秒前
大杨发布了新的文献求助10
22秒前
22秒前
23秒前
彩虹发布了新的文献求助10
23秒前
24秒前
25秒前
wu完成签到,获得积分20
25秒前
领导范儿应助阿讓采纳,获得10
26秒前
小梨完成签到,获得积分10
26秒前
lin完成签到 ,获得积分10
27秒前
linuo发布了新的文献求助10
28秒前
29秒前
DD发布了新的文献求助10
29秒前
ZHJ发布了新的文献求助10
29秒前
32秒前
lili完成签到,获得积分10
33秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
Principles of town planning: translating concepts to applications 1000
内視鏡的に摘除しえた十二指腸乳頭部腫瘍の2例 660
Management and the Arts 510
Matrix Methods in Data Mining and Pattern Recognition Second Edition 510
Positive Obsession: The Life and Times of Octavia E. Butler 500
Interpolation and Regression Models for the Chemical Engineer: Solving Numerical Problems 400
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 内科学 物理 复合材料 催化作用 细胞生物学 无机化学 光电子学 物理化学 电极 基因
热门帖子
关注 科研通微信公众号,转发送积分 7687349
求助须知:如何正确求助?哪些是违规求助? 9250455
关于积分的说明 19962384
捐赠科研通 7260374
什么是DOI,文献DOI怎么找? 3289826
关于科研通互助平台的介绍 2446680
邀请新用户注册赠送积分活动 2294359