Identification of the Key Immune Cells and Genes for the Diagnostics and Therapeutics of Meningioma

免疫系统 癌变 基因 癌症研究 医学 生物 免疫学 遗传学
作者
Jiawei Chen,Lingyang Hua,Xiupeng Xu,Zeyidan Jiapaer,Jiaojiao Deng,Daijun Wang,Zuo‐Feng Zhang,Guoping Li,Ye Gong
出处
期刊:World Neurosurgery [Elsevier BV]
卷期号:176: e501-e514 被引量:5
标识
DOI:10.1016/j.wneu.2023.05.090
摘要

Dysregulation of immune infiltration critically contributes to the tumorigenesis and progression of meningiomas. However, the landscape of immune microenvironment and key genes correlated with immune cell infiltration remains unclear. Four Gene Expression Omnibus data sets were included. CIBERSORT algorithm was utilized to analyze the immune cell infiltration in samples. Wilcoxon test, Random Forest algorithm, and Least Absolute Shrinkage and Selection Operator regression were adopted in identifying significantly different infiltrating immune cells and differentially expressed genes (DEGs). Functional enrichment analysis was performed by Kyoto Encyclopedia of Genes and Genomes and Gene Ontology. The correlation between genes and immune cells was evaluated via Spearman's correlation analysis. Receiver Operator Characteristic curve analysis evaluated the markers' diagnostic effectiveness. The mRNA-miRNA and Drug-Gene-Immune cell interaction networks were constructed to identify potential diagnostic and therapeutic targets. Plasma cells, M1 macrophages, M2 macrophages, neutrophils, eosinophils, and activated NK cells were the significantly different infiltrating immune cells in meningioma. A total of 951 DEGs, associated with synaptic function and structure, ion transport regulation, brain function, and immune-related pathways, were identified. Among 11 hub DEGs, RYR2 and TTR were correlated with plasma cells; SNCG was associated with NK cells; ADCY1 exhibited excellent diagnostic effectiveness; and ADCY1, BMX, KCNA5, SLCO4A1, and TTR could be considered as therapeutic targets. ADCY1 can be identified as a diagnostic marker; ADCY1, BMX, KCNA5, SLCO4A1, and TTR are potential therapeutic targets, and their associations with macrophages, neutrophils, NK cells, and plasma cells might impact the tumorigenesis of meningiomas.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
3秒前
xiu发布了新的文献求助10
3秒前
悦耳代真发布了新的文献求助10
4秒前
6秒前
6秒前
蜡笔完成签到,获得积分10
6秒前
搜集达人应助海小豆采纳,获得10
8秒前
爆米花应助ChaiHaobo采纳,获得10
9秒前
JamesPei应助彩云追月采纳,获得10
10秒前
zhengly23完成签到,获得积分10
11秒前
Percy完成签到,获得积分10
11秒前
yeape发布了新的文献求助10
11秒前
13秒前
hx发布了新的文献求助10
13秒前
13秒前
北世发布了新的文献求助10
14秒前
Joshua发布了新的文献求助10
15秒前
guohuan完成签到,获得积分10
17秒前
不加糖发布了新的文献求助10
19秒前
李爱国应助莫道雪落奈何采纳,获得10
20秒前
爱大美完成签到,获得积分10
20秒前
科研通AI5应助lxqd1采纳,获得10
20秒前
huifang完成签到,获得积分10
21秒前
wangw061应助lyp7028采纳,获得10
21秒前
千幻完成签到,获得积分10
22秒前
田様应助yeape采纳,获得10
22秒前
22秒前
昌升完成签到,获得积分20
23秒前
悦耳代真完成签到,获得积分20
25秒前
rebubu完成签到 ,获得积分10
26秒前
26秒前
26秒前
28秒前
77paocai完成签到,获得积分10
29秒前
30秒前
30秒前
嫩嫩发布了新的文献求助10
31秒前
TWO宝发布了新的文献求助10
31秒前
开心的曼岚完成签到,获得积分10
31秒前
科研通AI2S应助zjq采纳,获得10
31秒前
高分求助中
Encyclopedia of Mathematical Physics 2nd edition 888
Technologies supporting mass customization of apparel: A pilot project 600
Hydropower Nation: Dams, Energy, and Political Changes in Twentieth-Century China 500
Introduction to Strong Mixing Conditions Volumes 1-3 500
Pharmacological profile of sulodexide 400
Optical and electric properties of monocrystalline synthetic diamond irradiated by neutrons 320
共融服務學習指南 300
热门求助领域 (近24小时)
化学 材料科学 医学 生物 工程类 有机化学 物理 生物化学 纳米技术 计算机科学 化学工程 内科学 复合材料 物理化学 电极 遗传学 量子力学 基因 冶金 催化作用
热门帖子
关注 科研通微信公众号,转发送积分 3805407
求助须知:如何正确求助?哪些是违规求助? 3350368
关于积分的说明 10348817
捐赠科研通 3066317
什么是DOI,文献DOI怎么找? 1683676
邀请新用户注册赠送积分活动 809123
科研通“疑难数据库(出版商)”最低求助积分说明 765254