Mechanical Strength: An Unrecognised Target in the Genetic Improvement of Crops

生物 木质素 生物发生 转录组 转录因子 基因 数量性状位点 计算生物学 播种 增稠 作物 农学 细胞生物学 植物 近交系 特质 生物技术 基因组 基因调控网络 细胞壁 农业 基因组学 遗传学 基因表达调控
作者
Qingbiao Shi,Qibin Wang,Guodong Wang,Yiduo An,H. J. Yang,Qing Lin Tao,Ying Xia,Zihao Jiao,Naiqian Li,Ran Gao,Junfen Li,Fanying Kong,Haisen Zhang,Pinghua Li,Mingyue Gou,Haiyang Wang,Bosheng Li,Gang Li
出处
期刊:Plant Biotechnology Journal [Wiley]
卷期号:24 (6): 4190-4203
标识
DOI:10.1111/pbi.70627
摘要

Leaf angle (LA) is a crucial agronomic trait influencing planting density and crop yield. Previous research highlighted the importance of cellular variations in the ligular region for determining LA, but the underlying regulatory mechanisms remain unclear. Here, we demonstrate LA is not a static trait, but rather represents a dynamic equilibrium between mechanical forces maintaining leaf erectness and those promoting blade drooping. To quantify the drooping tendency, we introduce gravitational moments, which show positive correlations with LA, blade length (BL) and blade weight (BWt). Notably, the mechanical forces are tightly regulated by the sheath layers surrounding the stalk and by the thickness and lignin deposition on the ligular region of sclerenchyma (SC) cells. Furthermore, we applied single-nucleus transcriptome analyses (snRNA-seq) to construct a comprehensive transcriptional atlas spanning the ligular regions of compact-type (Z58), intermediate-type (B73) and expanded-type (W22) inbred lines. Through the comparative analysis of snRNA-seq and RNA-seq of three inbred lines, we identified the adaxial hypodermis (HP) cells as pivotal sites where lignin biogenesis and metabolism genes were specifically expressed in compact-type Z58, consistent with the lignin deposition pattern. Notably, we discovered that the NAM, ATAF and CUC (NAC) transcription factor-encoding genes NAC secondary wall thickening promoting factor 2 (NST2) and NST3, which mediate lignin biogenesis in the ligular region, especially on the adaxial side, play key roles in reinforcing mechanical support and reducing LA. Collectively, this study advances our understanding of ligular development and LA regulatory mechanisms and provides strategic insights for breeding crops with improved agricultural productivity.
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