Prospects for using DNA barcoding to identify spiders in species-rich genera

多系 近亲 DNA条形码 单系 生物 物种复合体 分类单元 分类学(生物学) 进化生物学 遗传分化 分歧(语言学) 动物 生态学 系统发育学 克莱德 系统发育树 遗传多样性 生物化学 语言学 人口 社会学 哲学 人口学 基因
作者
Gergin Blagoev,Paul D. N. Hebert,Sarah J. Adamowicz,Emily A. Robinson
出处
期刊:ZooKeys [Pensoft Publishers]
卷期号:16: 27-46 被引量:127
标识
DOI:10.3897/zookeys.16.239
摘要

While previous research has indicated the utility of DNA barcoding in identifying spider species sampled from a localized region, the effectiveness of this method over a broader geographic scale and with denser taxon sampling has not yet been extensively considered. Using both new and published data from 1801 individuals belonging to 361 morphospecies, this study examined intra- and interspecific divergences for 19 genera that were each represented by at least 10 morphospecies. We particularly focused on increasing species-level sampling in order to better characterize levels of interspecific divergence within species-rich genera and to examine the prevalence of a “barcode gap” (discontinuity between intra- and interspecific divergences). Overall, the mean intraspecific divergence value was found to be 2.15%, the average maximum intraspecific divergence was 3.16%, while the mean divergence between nearest interspecific neighbours was 6.77%, demonstrating the typical presence of a barcode gap. Of the 66% of morphospecies that formed monophyletic sequence clusters, the majority (92.5%) possessed a barcode gap. We also examine possible biological explanations for the large proportion of paraphyletic and polyphyletic clusters and discuss the need for further taxonomic investigations. The overlap between intra- and interspecific divergences was not unexpected for some ‘species’, such as Pardosa groenlandica, since prior morphological studies have suggested that it is an example of a species complex. However, other cases of high intraspecific divergences may reflect cryptic species diversity, indicating the need for a taxonomic approach that combines both morphological and molecular methods. The list of the species, COI sequences, and source references used in the analysis is published as a dataset under doi: 10.3897/zookeys.16.239.app.A.ds. The list of analyzed species, mean and maximum intraspecific divergences, distances to the nearest neighbouring species in its genus, general localities, and lifestyle characteristics is published as a dataset under doi: 10.3897/zookeys.16.239.app.B.ds.

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
1秒前
KEFE发布了新的文献求助20
2秒前
共产主义战士的应助被uiui采纳,获得10
3秒前
meow完成签到 ,获得积分10
4秒前
6秒前
医院的孩子完成签到,获得积分10
6秒前
6秒前
zyy发布了新的文献求助10
7秒前
Rehan完成签到,获得积分10
7秒前
10秒前
SciGPT的应助被June采纳,获得10
10秒前
hututu发布了新的文献求助10
10秒前
健壮冬日完成签到,获得积分10
10秒前
godvcc完成签到,获得积分10
10秒前
木羽完成签到,获得积分10
11秒前
大个的应助被july7292采纳,获得10
11秒前
zs发布了新的文献求助20
12秒前
科研通AI6.2的应助被或无情采纳,获得10
12秒前
缓慢听筠完成签到,获得积分10
13秒前
正直三颜发布了新的文献求助10
13秒前
14秒前
14秒前
14秒前
vicky完成签到,获得积分10
15秒前
Chen完成签到,获得积分10
15秒前
16秒前
栗子发布了新的文献求助10
17秒前
Jessica完成签到,获得积分10
17秒前
杨大大完成签到,获得积分10
18秒前
18秒前
un发布了新的文献求助10
19秒前
CipherSage的应助被HM采纳,获得10
20秒前
白舟完成签到 ,获得积分10
20秒前
缓慢听筠发布了新的文献求助10
20秒前
June完成签到 ,获得积分10
20秒前
地之衣兮完成签到 ,获得积分10
21秒前
科研通AI6.2的应助被TX采纳,获得10
21秒前
ABJ完成签到 ,获得积分10
22秒前
23秒前
科研姣发布了新的文献求助30
23秒前
高分求助中
(应助此贴封号)通过应助OA文献获取积分 10000
Rosenblum, Global Change Biology 800
Computational Chemical Reaction Engineering: Modeling, Simulation, and Design with MATLAB 600
Organizational Behavior 510
Management and the Arts 510
Production Logging: Theoretical and Interpretive Elements 400
CLSI C56QG Examples of Hemolyzed, Icteric, and Lipemic/Turbid Samples Quick Guide 400
热门求助领域 (近24小时)
化学 材料科学 医学 生物 计算机科学 工程类 纳米技术 内科学 物理 有机化学 化学工程 生物化学 复合材料 光电子学 细胞生物学 心理学 量子力学 催化作用 物理化学 电极
热门帖子
关注 科研通微信公众号,转发送积分 7817372
求助须知:如何正确求助?哪些是违规求助? 9346023
关于积分的说明 20533051
捐赠科研通 7409848
什么是DOI,文献DOI怎么找? 3331673
关于科研通互助平台的介绍 2478072
邀请新用户注册赠送积分活动 2351322