1567-P: Integrating Bioinformatics and Machine Learning to Identify Lactylation-Related Diagnostic Biomarkers and Characterize Immune Cell Infiltration in Nonalcoholic Fatty Liver Disease

免疫系统 基因 生物 非酒精性脂肪肝 计算生物学 小RNA 疾病 遗传学 生物信息学 脂肪肝 医学 病理
作者
Junyi Zhang,XUEYAN WU
出处
期刊:Diabetes [American Diabetes Association]
卷期号:73 (Supplement_1)
标识
DOI:10.2337/db24-1567-p
摘要

Background: This study sought to explore potential lactylation-related targets for non-alcoholic fatty liver disease (NAFLD) and examine the role of immune cell infiltration in the disease's progression. Methods: Gene expression datasets were sourced from the Gene Expression Omnibus collection, and genomic enrichment analysis was conducted utilizing differentially expressed genes (DEGs). Overlapping lactylation and NAFLD DEGs were determined using a Venn diagram, and a protein-protein interaction (PPI) network was developed. To ascertain immune patterns, the ConsensusClusterPlus package in R was employed. Key genes were identified using three machine-learning algorithms: random forest, support vector machine-recursive feature elimination, and least absolute shrinkage and selection operator. The infiltration of immune cells was assessed by the GSVA package. The upstream transcriptional factors (TFs) and microRNAs (miRNAs) were predicted using the Regnetwork database and NetworkAnalyst. Results: The intersection of key genes and DEGs yielded 34 genes associated with lactylation and NAFLD, comprising 22 upregulated and 12 downregulated genes. Eight genes, namely FABP5, SIRT1, TERF2, ADNP, BTF3, CDC5L, DDX17, and MNDA, were identified as diagnostic indicators with relatively high diagnostic specificity for NAFLD. The interaction among key genes were shown by PPI network. A spectrum of immune cells was found to potentially contribute to NAFLD development. The association between key genes and immune infiltration were revealed by the correlation analysis. Also, we predicted the upstream TFs and miRNAs of hub genes. Conclusions: Our research identified 8 key genes related to lactylation and analyzed the immune cell infiltration characteristics in NAFLD patients, thereby offering additional insights into the potential mechanisms influencing NAFLD prognosis. Disclosure J. Zhang: None. X. Wu: None.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
刚刚
阿浩完成签到,获得积分10
刚刚
DMTloveforever完成签到,获得积分10
刚刚
1秒前
Fanorm发布了新的文献求助10
1秒前
1秒前
用户5063899完成签到,获得积分10
2秒前
东asdfghjkl发布了新的文献求助30
2秒前
samtol完成签到,获得积分10
2秒前
许七安发布了新的文献求助10
2秒前
xuan完成签到,获得积分10
2秒前
Lucky完成签到,获得积分10
2秒前
陈永伟完成签到,获得积分10
2秒前
科研通AI6.3应助tianying采纳,获得10
3秒前
能干函完成签到,获得积分10
4秒前
hyf完成签到,获得积分10
4秒前
所所应助周周采纳,获得10
4秒前
瑞士卷梦女完成签到 ,获得积分10
5秒前
5秒前
6秒前
6秒前
Orange应助好爱science采纳,获得10
6秒前
6秒前
小蘑菇应助暖羊羊Y采纳,获得10
6秒前
Liz111完成签到,获得积分10
6秒前
7秒前
痛米完成签到 ,获得积分10
7秒前
小李完成签到 ,获得积分10
7秒前
笨笨烨华完成签到 ,获得积分10
8秒前
ssss完成签到,获得积分10
9秒前
befond完成签到,获得积分10
9秒前
Bab完成签到,获得积分10
9秒前
可爱的函函应助牧笛采纳,获得10
9秒前
野性的念之完成签到,获得积分10
9秒前
胡图图完成签到,获得积分10
9秒前
林A完成签到,获得积分10
10秒前
yh发布了新的文献求助10
10秒前
英姑应助惜_采纳,获得10
10秒前
阿浩完成签到,获得积分10
11秒前
Ava应助张公子采纳,获得30
11秒前
高分求助中
Overcoming Stigma and Bias in Obesity Management 800
Malcolm Fraser : a biography 700
Signals, Systems, and Signal Processing 610
Bounds for Statistical Estimation in Semiparametric Models 500
Climate change and sports: Statistics report on climate change and sports 500
Forced degradation and stability indicating LC method for Letrozole: A stress testing guide 500
Ideology and Meaning-Making under the Putin Regime 450
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 物理 内科学 复合材料 催化作用 物理化学 光电子学 电极 细胞生物学 基因 无机化学
热门帖子
关注 科研通微信公众号,转发送积分 6474607
求助须知:如何正确求助?哪些是违规求助? 8277366
关于积分的说明 17650343
捐赠科研通 5555341
什么是DOI,文献DOI怎么找? 2910042
邀请新用户注册赠送积分活动 1886788
关于科研通互助平台的介绍 1739458