白三烯B4
对接(动物)
受体
化学
G蛋白偶联受体
蛋白质结构
结合位点
药物发现
药物设计
合理设计
生物物理学
配体(生物化学)
细胞生物学
生物化学
生物
炎症
医学
免疫学
遗传学
护理部
作者
Na Wang,Xinheng He,Jing Zhao,Hualiang Jiang,Xi Cheng,Xia Yu,H. Eric Xu,Yuanzheng He
标识
DOI:10.1038/s41467-022-28820-9
摘要
Abstract Leukotriene B4 receptor 1 (BLT1) plays crucial roles in the acute inflammatory responses and is a valuable target for anti-inflammation treatment, however, the mechanism by which leukotriene B4 (LTB4) activates receptor remains unclear. Here, we report the cryo-electron microscopy (cryo-EM) structure of the LTB4 -bound human BLT1 in complex with a G i protein in an active conformation at resolution of 2.91 Å. In combination of molecule dynamics (MD) simulation, docking and site-directed mutagenesis, our structure reveals that a hydrogen-bond network of water molecules and key polar residues is the key molecular determinant for LTB4 binding. We also find that the displacement of residues M101 3.36 and I271 7.39 to the center of receptor, which unlock the ion lock of the lower part of pocket, is the key mechanism of receptor activation. In addition, we reveal a binding site of phosphatidylinositol (PI) and discover that the widely open ligand binding pocket may contribute the lack of specificity and efficacy for current BLT1-targeting drug design. Taken together, our structural analysis provides a scaffold for understanding BLT1 activation and a rational basis for designing anti-leukotriene drugs.
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