Conformation Dynamics and Polarization Effect of α,α-Trehalose in a Vacuum and in Aqueous and Salt Solutions

海藻糖 水溶液 化学 分子动力学 平均力势 分子 密度泛函理论 化学物理 结晶学 计算化学 热力学 物理化学 有机化学 物理
作者
Zigui Kan,Xiufen Yan,Jing Ma
出处
期刊:Journal of Physical Chemistry A [American Chemical Society]
卷期号:119 (9): 1573-1589 被引量:30
标识
DOI:10.1021/jp507692h
摘要

Conformational changes of α,α-trehalose in a vacuum, water, and 0–20 wt % NaCl solutions were investigated by means of molecular dynamics (MD) simulations at different levels of density function theory (DFT) and with fixed-charge nonpolarizable and variable-charge force fields (FFs), respectively. The relative thermodynamic stability of trehalose is enhanced by the formation of intercycle and/or intracycle hydrogen bonds, but some thermodynamically unfavorable structures can be sampled in the DFT-based ab initio MD simulation. The polarization effects of polar trehalose molecule in aqueous and NaCl solutions were studied by a series of MD simulations with both the conventional nonpolarizable and polarizable force field models. In the polarizable model, the partial charges of trehalose were updated every 2 ps using DFT calculations and fused with the other FF parameters for the energy calculation and MD simulation. Around the trehalose, water molecules located in an asymmetry model and trehalose have a stronger tendency to bind with water molecules than Na+ and Cl– ions. When the trehalose concentration is increased from 3.26 to 6.31 wt % in salt aqueous solution, the two trehalose molecules periodically approach each other in a nearly anhydrate state and leave a way to keep the favorable hydration structure with the mean trehalose–trehalose distance of 8.6 Å. The similarity between the solvated dimer packing styles (shoulder-by-shoulder or head-to-head) and crystal stacking can be used to make an extrapolation to higher sugar concentrations and to rationalize the bioprotection function of trehalose in high salt concentration.

科研通智能强力驱动
Strongly Powered by AbleSci AI
更新
PDF的下载单位、IP信息已删除 (2025-6-4)

科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
君衡完成签到 ,获得积分10
刚刚
kanglan发布了新的文献求助10
刚刚
桃子完成签到 ,获得积分10
1秒前
2秒前
clueless发布了新的文献求助10
2秒前
FashionBoy应助小俊采纳,获得10
3秒前
thinking发布了新的文献求助10
3秒前
rive发布了新的文献求助10
4秒前
隐形曼青应助啥也不会啊采纳,获得10
5秒前
5秒前
慕青应助ABLAT采纳,获得10
6秒前
7秒前
江小小完成签到,获得积分10
8秒前
8秒前
8秒前
9秒前
shanshan发布了新的文献求助10
10秒前
10秒前
clueless完成签到,获得积分10
10秒前
10秒前
彩色夏山发布了新的文献求助20
10秒前
荷欢笙完成签到,获得积分10
11秒前
12秒前
12秒前
Shine完成签到 ,获得积分10
13秒前
fish完成签到,获得积分10
13秒前
时鹏飞发布了新的文献求助10
13秒前
14秒前
lsrlsr发布了新的文献求助10
14秒前
孟一天发布了新的文献求助30
16秒前
优雅苑睐发布了新的文献求助10
16秒前
16秒前
16秒前
17秒前
大方夏兰完成签到 ,获得积分10
18秒前
科研通AI5应助吃人陈采纳,获得10
18秒前
ChatGPT发布了新的文献求助10
18秒前
20秒前
西瓜完成签到,获得积分10
21秒前
21秒前
高分求助中
(应助此贴封号)【重要!!请各位详细阅读】【科研通的精品贴汇总】 10000
Les Mantodea de Guyane: Insecta, Polyneoptera [The Mantids of French Guiana] 3000
F-35B V2.0 How to build Kitty Hawk's F-35B Version 2.0 Model 2500
줄기세포 생물학 1000
The Netter Collection of Medical Illustrations: Digestive System, Volume 9, Part III - Liver, Biliary Tract, and Pancreas (3rd Edition) 600
INQUIRY-BASED PEDAGOGY TO SUPPORT STEM LEARNING AND 21ST CENTURY SKILLS: PREPARING NEW TEACHERS TO IMPLEMENT PROJECT AND PROBLEM-BASED LEARNING 500
2025-2031全球及中国蛋黄lgY抗体行业研究及十五五规划分析报告(2025-2031 Global and China Chicken lgY Antibody Industry Research and 15th Five Year Plan Analysis Report) 400
热门求助领域 (近24小时)
化学 材料科学 医学 生物 工程类 有机化学 生物化学 物理 内科学 纳米技术 计算机科学 化学工程 复合材料 遗传学 基因 物理化学 催化作用 冶金 细胞生物学 免疫学
热门帖子
关注 科研通微信公众号,转发送积分 4479124
求助须知:如何正确求助?哪些是违规求助? 3936672
关于积分的说明 12212621
捐赠科研通 3591315
什么是DOI,文献DOI怎么找? 1974897
邀请新用户注册赠送积分活动 1012058
科研通“疑难数据库(出版商)”最低求助积分说明 905479