A highly specific PCR assay for detecting the fish ectoparasite Amyloodinium ocellatum

生物 寄生虫寄主 甲藻 动物 地中海 核糖体DNA 亚种 浮游生物 内转录区 水生动物 海水 生态学 地中海气候 核糖体RNA 渔业 系统发育学 基因 万维网 生物化学 计算机科学
作者
M. G. Levy,MF Poore,A. Colorni,E. J. Noga,MW Vandersea,R. Wayne Litaker
出处
期刊:Diseases of Aquatic Organisms [Inter-Research]
卷期号:73: 219-226 被引量:33
标识
DOI:10.3354/dao073219
摘要

DAO Diseases of Aquatic Organisms Contact the journal Facebook Twitter RSS Mailing List Subscribe to our mailing list via Mailchimp HomeLatest VolumeAbout the JournalEditorsSpecials DAO 73:219-226 (2007) - doi:10.3354/dao073219 A highly specific PCR assay for detecting the fish ectoparasite Amyloodinium ocellatum Michael G. Levy1,*, Matthew F. Poore1, Angelo Colorni2, Edward J. Noga1, Mark W. Vandersea3, R. Wayne Litaker3 1College of Veterinary Medicine, North Carolina State University, 4700 Hillsborough Street, Raleigh, North Carolina 27606-1499, USA 2National Center for Mariculture, Israel Oceanographic & Limnological Research, PO Box 1212, Eilat 88112, Israel 3Center for Coastal Fisheries and Habitat Research, NOAA National Ocean Service, 101 Pivers Island Road, Beaufort, North Carolina 28516-9722, USA *Email: mike_levy@ncsu.edu ABSTRACT: Amyloodiniosis, caused by the dinoflagellate ectoparasite Amyloodinium ocellatum, is one of the most serious diseases affecting marine fish in warm and temperate waters. Current diagnostic methods rely entirely on the microscopic identification of parasites on the skin or gills of infested fish. However, subclinical infestations usually go undetected, while no method of detecting the free-swimming, infective (dinospore) stage has been devised. Targeting the parasite's ribosomal DNA region, we have developed a sensitive and specific PCR assay that can detect as little as a single cell from any of the 3 stages of the parasite's life cycle (trophont, tomont, dinospore). This assay performs equally well in a simple artificial seawater medium and in natural seawater containing a plankton community assemblage. The assay is also not inhibited by gill tissue. Sequence analysis of the internal transcribed spacer region of 5 A. ocellatum isolates, obtained from fish in the Red Sea (Israel), eastern Mediterranean Sea (Israel), Adriatic Sea (Italy), Gulf of Mexico (Florida), and from an unknown origin, revealed insignificant variation, indicating that all isolates were the same species. However, 3 of these isolates propagated in cell culture varied in behavior and morphology, and these differences were consistent during at least 2 yr in culture. Thus, our findings do not eliminate the possibility that different strains are in fact 'subspecies' or lower taxa, which may also differ in pathogenic and immunogenic characteristics, environmental tolerance, and other features. KEY WORDS: Amyloodiniosis · rDNA probe · Epidemiology Full text in pdf format PreviousNextExport citation RSS - Facebook - Tweet - linkedIn Cited by Published in DAO Vol. 73, No. 3. Online publication date: January 18, 2007 Print ISSN: 0177-5103; Online ISSN: 1616-1580 Copyright © 2007 Inter-Research.

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