虚拟筛选
对接(动物)
自动停靠
组合化学
化学
抗真菌
氟康唑
结合位点
药物设计
环丙沙星
立体化学
配体(生物化学)
抗菌剂
药品
活动站点
计算生物学
药物发现
药理学
生物化学
生物
医学
抗生素
酶
有机化学
微生物学
受体
护理部
基因
生物信息学
作者
Manish Devgun,Sushil Prasad,SukhbirLal Khokra,Rakesh Narang
出处
期刊:World Journal Of Advanced Research and Reviews
[GSC Online Press]
日期:2021-10-18
卷期号:12 (1): 186-214
被引量:2
标识
DOI:10.30574/wjarr.2021.12.1.0476
摘要
Molecular docking is the identification of ligand’s correct binding geometry i.e pose in the binding site and estimation of its binding affinity for the rational design of drug molecule. The current study endeavored the high throughput insilico screening of 24 compounds docked with their respective protein using PyRx-Virtual Screening Tool software. Out of 24 compounds, almost all test compounds showed a very good binding affinity score. Fluconazole was used as a standard drug in case of Antifungal, Ciprofloxacin in case of Antibacterial, and Albendazole in case of Antihelmintics. More negative is the binding free energy score, more favorable is the pose for binding to protein active site. Based on H-bond interactions of these 24 compounds, Compounds 3a5, 3c3, 3d5, 3d6 were found to be the similar outcome for antifungal activity as fluconazole, Compound3a1 for antibacterial, and Compounds 3b5, 3d6 for the antihelmintic agent. Furthermore, the affinity of any small ligand molecules can be considered as an extraordinary tool in the field of drug design and offer imminent in future examination to build up potent antimicrobial agents.
科研通智能强力驱动
Strongly Powered by AbleSci AI