Comprehensive analysis to identify DLEU2L/TAOK1 axis as a prognostic biomarker in hepatocellular carcinoma

竞争性内源性RNA 肝细胞癌 张力素 小RNA 医学 肿瘤科 PTEN公司 癌症研究 生物信息学 计算生物学 基因 核糖核酸 长非编码RNA 生物 信号转导 遗传学 PI3K/AKT/mTOR通路
作者
Yi Shi,Dandan Zhang,Ji‐Bin Liu,Xiaoli Yang,Rui Xin,Chengyou Jia,Huimin Wang,Gai‐Xia Lu,Pei‐Yao Wang,Yu Liu,Zi-Jin Li,Jing Deng,Qinlu Lin,Liang Ma,Shanshan Feng,Xiaoqi Chen,Xiaodong Zheng,You Zhou,Yongjun Hu,Huaqun Yin,Li Tian,Li‐Peng Gu,Zhongwei Lv,Fei Yu,Wen Li,Yu‐Shui Ma,Da Fu
出处
期刊:Molecular therapy. Nucleic acids [Cell Press]
卷期号:23: 702-718 被引量:29
标识
DOI:10.1016/j.omtn.2020.12.016
摘要

Hepatocellular carcinoma (HCC) is one of the deadliest malignant tumors that are harmful to human health. Increasing evidence has underscored the critical role of the competitive endogenous RNA (ceRNA) regulatory networks among various human cancers. However, the complexity and behavior characteristics of the ceRNA network in HCC were still unclear. In this study, we aimed to clarify a phosphatase and tensin homolog (PTEN)-related ceRNA regulatory network and identify potential prognostic markers associated with HCC. The expression profiles of three RNAs (long non-coding RNAs [lncRNAs], microRNAs [miRNAs], and mRNAs) were extracted from The Cancer Genome Atlas (TCGA) database. The DLEU2L-hsa-miR-100-5p/ hsa-miR-99a-5p-TAOK1 ceRNA network related to the prognosis of HCC was obtained by performing bioinformatics analysis. Importantly, we identified the DLEU2L/TAOK1 axis in the ceRNA by using correlation analysis, and it appeared to become a clinical prognostic model by Cox regression analysis. Furthermore, methylation analyses suggested that the abnormal upregulation of the DLEU2L/TAOK1 axis likely resulted from hypomethylation, and immune infiltration analysis showed that the DLEU2L/TAOK1 axis may have an impact on the changes in the tumor immune microenvironment and the development of HCC. In summary, the current study constructing a ceRNA-based DLEU2L/TAOK1 axis might be a novel important prognostic factor associated with the diagnosis and prognosis of HCC. Hepatocellular carcinoma (HCC) is one of the deadliest malignant tumors that are harmful to human health. Increasing evidence has underscored the critical role of the competitive endogenous RNA (ceRNA) regulatory networks among various human cancers. However, the complexity and behavior characteristics of the ceRNA network in HCC were still unclear. In this study, we aimed to clarify a phosphatase and tensin homolog (PTEN)-related ceRNA regulatory network and identify potential prognostic markers associated with HCC. The expression profiles of three RNAs (long non-coding RNAs [lncRNAs], microRNAs [miRNAs], and mRNAs) were extracted from The Cancer Genome Atlas (TCGA) database. The DLEU2L-hsa-miR-100-5p/ hsa-miR-99a-5p-TAOK1 ceRNA network related to the prognosis of HCC was obtained by performing bioinformatics analysis. Importantly, we identified the DLEU2L/TAOK1 axis in the ceRNA by using correlation analysis, and it appeared to become a clinical prognostic model by Cox regression analysis. Furthermore, methylation analyses suggested that the abnormal upregulation of the DLEU2L/TAOK1 axis likely resulted from hypomethylation, and immune infiltration analysis showed that the DLEU2L/TAOK1 axis may have an impact on the changes in the tumor immune microenvironment and the development of HCC. In summary, the current study constructing a ceRNA-based DLEU2L/TAOK1 axis might be a novel important prognostic factor associated with the diagnosis and prognosis of HCC.

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
科研通AI6.1应助yy采纳,获得10
2秒前
3秒前
励志发SCI完成签到 ,获得积分10
4秒前
4秒前
风11发布了新的文献求助10
7秒前
7秒前
7秒前
yuquan完成签到,获得积分10
8秒前
lilian完成签到,获得积分10
9秒前
徐星军完成签到,获得积分10
11秒前
科研通AI6.3应助风11采纳,获得10
12秒前
打打应助malistm采纳,获得10
13秒前
13秒前
13秒前
唠叨的灵安完成签到 ,获得积分10
13秒前
14秒前
刘歌发布了新的文献求助20
14秒前
刘小小123完成签到,获得积分10
14秒前
搜集达人应助张三采纳,获得10
15秒前
lius完成签到,获得积分10
16秒前
17秒前
18秒前
yy完成签到,获得积分10
18秒前
zzy发布了新的文献求助10
19秒前
风11完成签到,获得积分10
19秒前
怀中坚果发布了新的文献求助10
20秒前
不会起名o1o完成签到,获得积分10
21秒前
小扁大王发布了新的文献求助10
23秒前
木敏发布了新的文献求助10
23秒前
高高完成签到,获得积分10
23秒前
大可不必完成签到 ,获得积分10
23秒前
25秒前
彩色的听兰完成签到 ,获得积分10
25秒前
Walden5441应助小绵羊采纳,获得10
26秒前
Walden5441应助小绵羊采纳,获得10
26秒前
26秒前
务实的亦巧完成签到,获得积分10
28秒前
malistm发布了新的文献求助10
31秒前
酷波er应助科研小菜鸡采纳,获得10
32秒前
帮帮我发布了新的文献求助60
33秒前
高分求助中
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
Metallurgy at high pressures and high temperatures 2000
Inorganic Chemistry Eighth Edition 1200
High Pressures-Temperatures Apparatus 1000
Free parameter models in liquid scintillation counting 1000
Standards for Molecular Testing for Red Cell, Platelet, and Neutrophil Antigens, 7th edition 1000
The Organic Chemistry of Biological Pathways Second Edition 800
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 物理 内科学 复合材料 催化作用 物理化学 光电子学 电极 细胞生物学 基因 无机化学
热门帖子
关注 科研通微信公众号,转发送积分 6323923
求助须知:如何正确求助?哪些是违规求助? 8140375
关于积分的说明 17066501
捐赠科研通 5376827
什么是DOI,文献DOI怎么找? 2853705
邀请新用户注册赠送积分活动 1831399
关于科研通互助平台的介绍 1682541