An online alpha-thalassemia carrier discrimination model based on random forest and red blood cell parameters for low HbA2 cases

地中海贫血 随机森林 计算机科学 β地中海贫血 人工智能 线性判别分析 接收机工作特性 判别函数分析 试验装置 统计 机器学习 模式识别(心理学) 医学 数学 内科学
作者
Pinning Feng,Yuzhe Li,Zhihao Liao,Zhenrong Yao,Wenbin Lin,Shuhua Xie,Beini Hu,Chencui Huang,Wei Liu,Hongxu Xu,Min Liu,Wenjia Gan
出处
期刊:Clinica Chimica Acta [Elsevier BV]
卷期号:525: 1-5 被引量:26
标识
DOI:10.1016/j.cca.2021.12.003
摘要

Since screening of α-thalassemia carriers by low HbA2 has a low positive predictive value (PPV), the PPV was as low as 40.97% in our laboratory, other more effective screening methods need to be devised. This study aimed at developing a machine learning model by using red blood cell parameters to identify α-thalassemia carriers from low HbA2 patients.Laboratory data of 1213 patients with low HbA2 used for modeling was randomly divided into the training set (849 of 1213, 70%) and the internal validation set (364 of 1213, 30%). In addition, an external data set (n = 399) was used for model validation. Fourteen machine learning methods were applied to construct a discriminant model. Performance was evaluated with accuracy, sensitivity, specificity, etc. and compared with 7 previously published discriminant function formulae.The optimal model was based on random forest with 5 clinical features. The PPV of the model was more than twice the PPV of HbA2, and the model had a high negative predictive value (NPV) at the same time. Compared with seven formulae in screening of α-thalassemia carriers, the model had a better accuracy (0.915), specificity (0.967), NPV (0.901), PPV (0.942) and area under the receiver operating characteristic curve (AUC, 0.948) in the independent test set.Use of a random forest-based model enables rapid discrimination of α-thalassemia carriers from low HbA2 cases.
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