生物
系统基因组学
一套
树(集合论)
可视化
进化生物学
生命之树(生物学)
数据科学
计算生物学
系统发育树
计算机科学
人工智能
基因
考古
遗传学
克莱德
数学
历史
数学分析
作者
Erfan Sayyari,James B. Whitfield,Siavash Mirarab
标识
DOI:10.1016/j.ympev.2018.01.019
摘要
Phylogenomics has ushered in an age of discordance. Analyses often reveal abundant discordances among phylogenies of different parts of genomes, as well as incongruences between species trees obtained using different methods or data partitions. Researchers are often left trying to make sense of such incongruences. Interpretive ways of measuring and visualizing discordance are needed, both among alternative species trees and gene trees, especially for specific focal branches of a tree. Here, we introduce DiscoVista, a publicly available tool that creates a suite of simple but interpretable visualizations. DiscoVista helps quantify the amount of discordance and some of its potential causes.
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