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Dyella aluminiiresistens sp. nov., a Al3+-tolerant bacterium with the ability to inhibit Fusarium oxysporum f. sp. melonis isolated from rhizosphere soil of muskmelon

根际 生物 尖孢镰刀菌 植物 细菌 土壤细菌 镰刀菌 拉伤 遗传学 解剖
作者
Yi Li,Jiaojiao Wang,Chunyuan Wu,Jian He,Qinfen Li,Xiao Deng,Huadong Tan
出处
期刊:International Journal of Systematic and Evolutionary Microbiology [Microbiology Society]
卷期号:75 (1) 被引量:1
标识
DOI:10.1099/ijsem.0.006611
摘要

A bacterial strain, designated as A6 T , was isolated from the rhizosphere soil of a healthy muskmelon in Wenchang, Hainan Province, China. The cells of strain A6 T were Gram-negative, aerobic, short rod and motile with a single polar flagellum. Strain A6 T could tolerate up to 55.0 mM Al 3+ and inhibited the growth of Fusarium oxysporum f. sp. melonis, which is the pathogen of muskmelon Fusarium wilt . Growth occurred at 15–37 ℃ (optimum at 30 ℃), pH 4.5–8.0 (optimum pH 6.5) and with 0–3.0 % NaCl (w/v; optimum, 0.5%). Strain A6 T shared the highest 16S rRNA gene sequence similarities with Dyella lutea Sa T (98.0%), followed by Dyella thiooxydans ATSB10 T (98.0%), Frateuria edaphi 5GH9-34 T (97.9%), Dyella nitratireducens DHG59 T (97.7%), Frateuria defendens DHo T (97.7%) and Frateuria soli 5GH9-11 T (97.7%). Phylogenetic trees based on 16S rRNA gene and genomic sequences indicated that strain A6 T belonged to the genus Dyella and formed a subclade with Dyella lutea Sa T and Dyella thiooxydans ATSB10 T . The average nucleotide identity (ANI), average amino acid identity (AAI) and digital DNA–DNA hybridization (dDDH) values between A6 T and its closely related type strains were 78.8–80.8 %, 70.0–71.7 % and 20.5–22.1 %, respectively. The sole respiratory quinone was ubiquinone-8 (Q-8). The polar lipid profile consisted of diphosphatidylglycerol (DPG), phosphatidylglycerol (PG), phosphatidylethanolamine (PE), two unidentified aminophospholipids (APL1-2) and three unidentified phospholipids (PL1-3). The major cellular fatty acids (≥5 %) were iso-C 17 : 0 , C 16 : 0 , summed feature 9 (iso-C 17 : 1 ω 9 c and/or C 16 : 0 10-methyl), iso-C 15 : 0 , iso-C 16 : 0 and anteiso-C 17 : 0 . The genome size of strain A6 T was 3.7 Mb with a DNA G+C content of 65.1%. Based on the phenotypic, phylogenetic, genotypic and chemotaxonomic features, strain A6 T represents a novel species in the genus Dyella , for which Dyella aluminiiresistens A6 T sp. nov. is proposed. The type strain is A6 T (= GDMCC 1.4640 T = KCTC 92542 T ).

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