Isolation and characterization of Novosphingobium aquae sp. nov. and Novosphingobium anseongense sp. nov., isolated from freshwater

生物 16S核糖体RNA 微生物学 亚精胺 基因组DNA 核糖体RNA 基因 遗传学 生物化学
作者
Ji Yeon Hong,Jung-Hun Jo,Se-Yoon Chun,Wan‐Taek Im
出处
期刊:International Journal of Systematic and Evolutionary Microbiology [Microbiology Society]
卷期号:75 (2)
标识
DOI:10.1099/ijsem.0.006688
摘要

Two novel Gram-stain-negative, aerobic, heterotrophic, non-motile bacterial strains, designated as AS3R-12 T and PS1R-30 T , were isolated from freshwater in South Korea. To determine their taxonomic positions, the strains were thoroughly characterized. Genomic analyses, based on 16S rRNA gene and draft genome sequence data, revealed that the two novel isolates, AS3R-12 T and PS1R-30 T , belonged to the genus Novosphingobium . AS3R-12 T showed the highest 16S rRNA gene similarity (97.7%) with Novosphingobium flavum UCT-28 T . In addition, PS1R-30 T showed 97.9% 16S rRNA gene similarity with Novosphingobium lentum NBRC 107847 T . The draft genome of strains AS3R-12 T and PS1R-30 T consisted of 4 149 275 and 4 969 838 bps, with DNA G+C content of 63.1 and 66.1 mol%, respectively. The average nucleotide identity between two strains and other related species was below 76.2%, and the digital DNA–DNA hybridization values with closely related species were below 20.8%, both lower than the species delineation threshold. Strains AS3R-12 T and PS1R-30 T contained the ubiquinone Q-10 as the major quinone and displayed a polyamine pattern with spermidine as the predominant polyamine. Additionally, their major fatty acids were characterized by C 16:1 ω7c /C 16:1 ω6c (summed feature 3) and C 18:1 ω7c /C 18:1 ω6c (summed feature 8). The major polar lipids of AS3R-12 T and PS1R-30 T were diphosphatidylglycerol (DPG), phosphatidylglycerol (PG), phosphatidylethanolamine (PE), sphingoglycolipid (SGL) and phosphatidylcholine (PC). Moreover, physiological and biochemical results allowed the phenotypic and genotypic differentiation of strains AS3R-12 T and PS1R-30 T from their closest and other species of the genus Novosphingobium with validly published names. Therefore, AS3R-12 T and PS1R-30 T represented novel species of the genus Novosphingobium , for which the names Novosphingobium aquae sp. nov. (type strain AS3R-12 T =KACC 23096 T =LMG 32950 T ) and Novosphingobium anseongense sp. nov. (type strain PS1R-30 T =KACC 23097 T =LMG 32951 T ) are proposed.

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
艾比西地完成签到,获得积分10
2秒前
2秒前
科研爱好者完成签到,获得积分10
7秒前
Kao应助科研通管家采纳,获得10
13秒前
Kao应助科研通管家采纳,获得10
13秒前
Kao应助科研通管家采纳,获得10
13秒前
14秒前
小莫完成签到 ,获得积分10
21秒前
无心的星月完成签到 ,获得积分10
24秒前
净心发布了新的文献求助10
26秒前
KamilahKupps完成签到,获得积分10
32秒前
34秒前
文艺的冬卉完成签到,获得积分20
39秒前
lyra1111完成签到,获得积分10
46秒前
Li完成签到,获得积分10
49秒前
53秒前
56秒前
aaaaa888888888完成签到,获得积分10
58秒前
zk.yin发布了新的文献求助10
1分钟前
ABO发布了新的文献求助10
1分钟前
奋斗诗云完成签到 ,获得积分10
1分钟前
朴素海亦完成签到 ,获得积分10
1分钟前
nide发布了新的文献求助10
1分钟前
科研通AI6.3应助ABO采纳,获得10
1分钟前
心随以动完成签到 ,获得积分10
1分钟前
zero完成签到 ,获得积分10
1分钟前
1分钟前
修辛完成签到 ,获得积分10
1分钟前
LG发布了新的文献求助10
1分钟前
1分钟前
1分钟前
科研人完成签到 ,获得积分10
1分钟前
英姑应助LG采纳,获得10
1分钟前
Gaolongzhen完成签到 ,获得积分10
1分钟前
乐乐呀完成签到 ,获得积分10
1分钟前
yhjyhjyhj完成签到 ,获得积分10
1分钟前
鲜艳的梦菡完成签到 ,获得积分10
2分钟前
灵巧的长颈鹿完成签到,获得积分10
2分钟前
GTR的我完成签到 ,获得积分10
2分钟前
满意涵梅完成签到 ,获得积分10
2分钟前
高分求助中
Principles of Economics, 11th Edition 10000
University Physics with Modern Physics, 16th edition 10000
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
Development of a Bridge Weigh-In-Motion System: A technology to convert the bridge response to the passage of traffic into data on vehicle configurations, speeds, times of travel and weights 1000
ズームレンズの光学設計に関する研究 800
Fundamentals of Pharmaceutical and Biologics Regulations: A Global Perspective, Second Edition 700
Matrix Methods in Data Mining and Pattern Recognition Second Edition 610
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 内科学 物理 复合材料 催化作用 细胞生物学 无机化学 光电子学 物理化学 电极 基因
热门帖子
关注 科研通微信公众号,转发送积分 7282370
求助须知:如何正确求助?哪些是违规求助? 8903165
关于积分的说明 18833858
捐赠科研通 6953259
什么是DOI,文献DOI怎么找? 3207556
关于科研通互助平台的介绍 2377841
邀请新用户注册赠送积分活动 2182729