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Genome sequencing and assembly of Indian golden silkmoth, Antheraea assamensis Helfer (Saturniidae, Lepidoptera)

土星科 生物 基因组 细菌人工染色体 生殖器鳞翅目 全基因组测序 遗传学 柞蚕 基因 植物
作者
Himanshu Dubey,Appukuttannair R Pradeep,Kartik Neog,Rajal Debnath,P J Aneesha,Suraj Kumar Shah,Indumathi Kamatchi,Kangayam M. Ponnuvel,A. Ramesha,Kunjupillai Vijayan,Upendra Nongthomba,Utpal Bora,V. Sivaprasad,K.M. VijayaKumari,Kallare P. Arunkumar
出处
期刊:Genomics [Elsevier BV]
卷期号:116 (3): 110841-110841 被引量:2
标识
DOI:10.1016/j.ygeno.2024.110841
摘要

Muga silkworm (Antheraea assamensis), one of the economically important wild silkmoths, is unique among saturniid silkmoths. It is confined to the North-eastern part of India. Muga silk has the highest value among the other silks. Unlike other silkmoths, A. assamensis has a low chromosome number (n = 15), and ZZ/ZO sex chromosome system. Here, we report the first high-quality draft genome of A. assamensis, assembled by employing the Illumina and PacBio sequencing platforms. The assembled genome of A. assamensis is 501.18 Mb long, with 2697 scaffolds and an N50 of 683.23 Kb. The genome encompasses 18,385 protein-coding genes, 86.29% of which were functionally annotated. Phylogenetic analysis of A. assamensis revealed its divergence from other Antheraea species approximately 28.7 million years ago. Moreover, an investigation into detoxification-related gene families, CYP450, GST, and ABC-transporter, revealed a significant expansion in A. assamensis as compared to the Bombyx mori. This expansion is comparable to Spodoptera litura, suggesting adaptive responses linked to the polyphagous behavior observed in these insects. This study provides valuable insights into the molecular basis of evolutionary divergence and adaptations in muga silkmoth. The genome assembly reported in this study will significantly help in the functional genomics studies on A. assamensis and other Antheraea species along with comparative genomics analyses of Bombycoidea insects.
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