计算机科学
计算机数据存储
稳健性(进化)
喷泉密码
算法
分布式数据存储
汉明码
分布式计算
计算机硬件
生物
区块代码
解码方法
遗传学
基因
作者
Yang Xu,Xiaolong Shi,Loi Lei Lai,Congzhou Chen,H. Xu,Ming Deng
标识
DOI:10.3389/fgene.2023.1179867
摘要
DNA has become a popular choice for next-generation storage media due to its high storage density and stability. As the storage medium of life's information, DNA has significant storage capacity and low-cost, low-power replication and transcription capabilities. However, utilizing long double-stranded DNA for storage can introduce unstable factors that make it difficult to meet the constraints of biological systems. To address this challenge, we have designed a highly robust coding scheme called the "random code system," inspired by the idea of fountain codes. The random code system includes the establishment of a random matrix, Gaussian preprocessing, and random equilibrium. Compared to Luby transform codes (LT codes), random code (RC) has better robustness and recovery ability of lost information. In biological experiments, we successfully stored 29,390 bits of data in 25,700 bp chains, achieving a storage density of 1.78 bits per nucleotide. These results demonstrate the potential for using long double-stranded DNA and the random code system for robust DNA-based data storage.
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