生物结合
化学
酪氨酸
基质(水族馆)
组合化学
肽
酶
生物化学
结合
领域(数学分析)
序列(生物学)
单克隆抗体
肽序列
生物催化
底物特异性
氨基酸
分子
小分子
纳米技术
立体化学
蛋白质结构域
计算生物学
肽合成
分子识别
蛋白质结构
连接器
作者
Christopher Shelby,Kaylee P Kuzelka,Jonathan M. Ellis,Zhiyuan Yao,Amelia C. McCue,Rodney Park,Satish K. Nair,Albert A. Bowers,Brian Kuhlman
出处
期刊:
[Cold Spring Harbor Laboratory]
日期:2025-10-27
标识
DOI:10.1101/2025.10.27.684804
摘要
Enzyme mediated bioconjugation provides a method for easy and rapid formation of protein-protein and protein-small molecule conjugates under mild conditions. Promiscuous enzymes are of particular interest because they can catalyze conjugation reactions on a broad set of substrates. However, this promiscuity carries the risk of undesirable off-target modifications. To mitigate this effect, we used computational design to install a substrate recruitment domain (SRD) onto the promiscuous enzyme, tyrosinase. The redesigned tyrosinase, called D42, preferentially modifies tyrosine residues within the peptide core (core) linked to a 6-amino acid recognition motif/sequence (RS) specific for the SRD. Incorporation of the recognition sequence along with a neighboring tyrosine in peptides or proteins allows for rapid D42-mediated conversion of the tyrosine to an orthoquinone, which can be selectively modified with a variety of nucleophiles. We demonstrate the utility of our design system by rapidly installing cytotoxic molecules on a monoclonal antibody.
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