Regulatory effect of Epigallocatechin-3-O-gallate on circular RNA expression in mouse liver

环状RNA 生物 基因表达 微阵列分析技术 微阵列 基因 核糖核酸 分子生物学 非编码RNA 细胞生物学 癌症研究 遗传学
作者
Ren Yoshitomi,Motofumi Kumazoe,Kwanwoo Lee,Yuki Marugame,Yoshinori Fujimura,Hirofumi Tachibana
出处
期刊:Journal of Nutritional Biochemistry [Elsevier BV]
卷期号:: 109506-109506
标识
DOI:10.1016/j.jnutbio.2023.109506
摘要

There are few studies on the connection between food components and circular RNA (circRNA), a type of noncoding RNA that is significant for living organisms. (−)-Epigallocatechin-3-O-gallate (EGCG) has been reported to have various biological effects, and elucidation of the molecular mechanism is important for clarifying the functionality of EGCG. In the current study, we looked at how EGCG regulates the expression of circRNA in the liver, which expresses a lot of circRNAs. Mice were given EGCG (10 mg/kg b.w.) orally for one week before circRNA microarray testing was done on their livers. The microarray analysis revealed that mice treated with EGCG had altered expression of 35 circRNAs in their livers. To clarify the function of mmu_circRNA_011775, one of the circRNAs upregulated by EGCG, mouse liver cells after the mmu_circRNA_011775 expression vector was transfected into NMuLi cells, next-generation sequencing (NGS) was used to analyze the gene expression. NGS analysis shows that the expression of the genes responsible for liver fibrosis and inflammation. Gene ontology (GO) analysis showed that mmu_circRNA_011775 changed the meaning of GO terms associated with the cardiovascular system. In the microarray, EGCG altered 35 genes expression. Among them, pre-ribosomal RNA-derived circRNA mmu_circRNA_011775 regulated the expression of various genes related to liver fibrosis and cardiovascular system.
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