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Multimodal data fusion based on IGERNNC algorithm for detecting pathogenic brain regions and genes in Alzheimer’s disease

计算机科学 遗传算法 人工神经网络 人工智能 传感器融合 维数(图论) 机器学习 模式识别(心理学) 数据挖掘 算法 数学 纯数学
作者
Shuaiqun Wang,Kai Zheng,Wei Kong,Ruiwen Huang,Lulu Liu,Gen Wen,Yaling Yu
出处
期刊:Briefings in Bioinformatics [Oxford University Press]
卷期号:24 (1)
标识
DOI:10.1093/bib/bbac515
摘要

At present, the study on the pathogenesis of Alzheimer's disease (AD) by multimodal data fusion analysis has been attracted wide attention. It often has the problems of small sample size and high dimension with the multimodal medical data. In view of the characteristics of multimodal medical data, the existing genetic evolution random neural network cluster (GERNNC) model combine genetic evolution algorithm and neural network for the classification of AD patients and the extraction of pathogenic factors. However, the model does not take into account the non-linear relationship between brain regions and genes and the problem that the genetic evolution algorithm can fall into local optimal solutions, which leads to the overall performance of the model is not satisfactory. In order to solve the above two problems, this paper made some improvements on the construction of fusion features and genetic evolution algorithm in GERNNC model, and proposed an improved genetic evolution random neural network cluster (IGERNNC) model. The IGERNNC model uses mutual information correlation analysis method to combine resting-state functional magnetic resonance imaging data with single nucleotide polymorphism data for the construction of fusion features. Based on the traditional genetic evolution algorithm, elite retention strategy and large variation genetic algorithm are added to avoid the model falling into the local optimal solution. Through multiple independent experimental comparisons, the IGERNNC model can more effectively identify AD patients and extract relevant pathogenic factors, which is expected to become an effective tool in the field of AD research.

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