The role of cellular senescence-related genes in Asthma: Insights from bioinformatics and animal experiments

小桶 衰老 免疫系统 基因 生物 生物信息学 哮喘 表型 计算生物学 机制(生物学) 罗亚 遗传学 基因表达 转录组 信号转导 免疫学 哲学 认识论
作者
Xiang Zhang,Yali Xiao,Xin Shi,Hongling Shi,Zixing Dong,Cun‐Duo Tang
出处
期刊:International Immunopharmacology [Elsevier BV]
卷期号:130: 111770-111770 被引量:1
标识
DOI:10.1016/j.intimp.2024.111770
摘要

Asthma is a heterogeneous chronic respiratory disease, affecting about 10% of the global population. Cellular senescence is a multifaceted phenomenon defined as the irreversible halt of the cell cycle, commonly referred to as the senescence-associated secretory phenotype. Recent studies suggest that cellular senescence may play a role in asthma. This study aims to dissect the role and biological mechanisms of CSRGs in asthma, enhancing our understanding of the progression of asthma.The study utilized the GSE147878 dataset, employing methods like WGCNA, Differential analysis, Cibersort, GO, KEGG, unsupervised clustering, and GSVA to explore CSRGs functions and immune cell patterns in asthma. Machine learning identified key diagnostic genes, validated externally with the GSE165934 dataset and through qRT-PCR and WB experiments in animal models.From the GSE147878 dataset, 24 CSRGs were identified, highlighting their role in immune and inflammatory processes in asthma. Differences in CD4 naive T cells and activated dendritic cells between asthma and control groups underscored CSRGs' role in immune regulation. Cluster analysis revealed two distinct asthma patient groups with unique immune microenvironments. Machine learning identified five genes, leading to a TF-miRNA-mRNA network and singling out RHOA and RBM39 as key diagnostic genes, which were experimentally validated. Finally, a nomogram was created based on these genes.This study, utilizing bioinformatics and animal experiments, identified RHOA and RBM39 as key diagnostic genes for asthma, providing new insights into the potential role and biological mechanisms of CSRGs in asthma.
最长约 10秒,即可获得该文献文件

科研通智能强力驱动
Strongly Powered by AbleSci AI
科研通是完全免费的文献互助平台,具备全网最快的应助速度,最高的求助完成率。 对每一个文献求助,科研通都将尽心尽力,给求助人一个满意的交代。
实时播报
mm发布了新的文献求助10
刚刚
Ava应助xmz采纳,获得10
刚刚
刚刚
xiaxiaxia发布了新的文献求助10
刚刚
充电宝应助国泰民安采纳,获得10
刚刚
luo完成签到,获得积分10
1秒前
fy完成签到 ,获得积分10
1秒前
1秒前
小向完成签到,获得积分10
1秒前
1秒前
tywwxy发布了新的文献求助10
2秒前
2秒前
2秒前
2秒前
2秒前
11完成签到,获得积分10
2秒前
xqn完成签到,获得积分10
3秒前
eily完成签到,获得积分10
3秒前
念舍离发布了新的文献求助10
4秒前
4秒前
4秒前
4秒前
4秒前
4秒前
温柔白玉发布了新的文献求助10
5秒前
5秒前
浅晨完成签到,获得积分10
5秒前
林天翼发布了新的文献求助10
6秒前
热心市民小红花应助蓝天采纳,获得10
6秒前
热心市民小红花应助蓝天采纳,获得10
6秒前
听风里密码完成签到,获得积分10
6秒前
慕青应助wuqs采纳,获得10
6秒前
77发布了新的文献求助10
6秒前
qiushui发布了新的文献求助10
7秒前
7秒前
xmz发布了新的文献求助10
7秒前
可爱二娘发布了新的文献求助20
7秒前
舒服的白薇完成签到 ,获得积分10
7秒前
Xin发布了新的文献求助10
7秒前
iris完成签到,获得积分10
7秒前
高分求助中
Principles of Economics, 11th Edition 10000
University Physics with Modern Physics, 16th edition 10000
(应助此贴封号)【重要!!请各用户(尤其是新用户)详细阅读】【科研通的精品贴汇总】 10000
48V Low-voltage Power Distribution Network (PDN) Architecture Industry Report, 2024 800
Fundamentals of Pharmaceutical and Biologics Regulations: A Global Perspective, Second Edition 700
Direct and Iterative Linear System Solvers 500
Plato's Parmenides. A Constructive Reading 500
热门求助领域 (近24小时)
化学 材料科学 医学 生物 纳米技术 工程类 有机化学 化学工程 生物化学 计算机科学 内科学 物理 复合材料 催化作用 细胞生物学 无机化学 光电子学 物理化学 电极 基因
热门帖子
关注 科研通微信公众号,转发送积分 7301175
求助须知:如何正确求助?哪些是违规求助? 8919504
关于积分的说明 18891461
捐赠科研通 6965831
什么是DOI,文献DOI怎么找? 3211290
关于科研通互助平台的介绍 2380380
邀请新用户注册赠送积分活动 2188139