Proanthocyanidin B2 derived metabolites may be ligands for bile acid receptors S1PR2, PXR and CAR: anin silicoapproach

孕烷X受体 受体 生物信息学 核受体 生物化学 信号转导 G蛋白偶联胆汁酸受体 化学 G蛋白偶联受体 细胞信号 亲缘关系 生物 细胞生物学 转录因子 基因
作者
Skyler H. Hoang,Kevin M. Tveter,Esther Mezhibovsky,Diana E. Roopchand
出处
期刊:Journal of Biomolecular Structure & Dynamics [Informa]
卷期号:42 (8): 4249-4262
标识
DOI:10.1080/07391102.2023.2224886
摘要

AbstractAbstractBile acids (BAs) act as signaling molecules via their interactions with various nuclear (FXR, VDR, PXR and CAR) and G-protein coupled (TGR5, M3R, S1PR2) BA receptors. Stimulation of these BA receptors influences several processes, including inflammatory responses and glucose and xenobiotic metabolism. BA profiles and BA receptor activity are deregulated in cardiometabolic diseases; however, dietary polyphenols were shown to alter BA profile and signaling in association with improved metabolic phenotypes. We previously reported that supplementing mice with a proanthocyanidin (PAC)-rich grape polyphenol (GP) extract attenuated symptoms of glucose intolerance in association with changes to BA profiles, BA receptor gene expression, and/or downstream markers of BA receptor activity. Exact mechanisms by which polyphenols modulate BA signaling are not known, but some hypotheses include modulation of the BA profile via changes to gut bacteria, or alteration of ligand-availability via BA sequestration. Herein, we used an in silico approach to investigate putative binding affinities of proanthocyanidin B2 (PACB2) and PACB2 metabolites to nuclear and G-protein coupled BA receptors. Molecular docking and dynamics simulations revealed that certain PACB2 metabolites had stable binding affinities to S1PR2, PXR and CAR, comparable to that of known natural and synthetic BA ligands. These findings suggest PACB2 metabolites may be novel ligands of S1PR2, CAR, and PXR receptors.Communicated by Ramaswamy H. SarmaKeywords: Polyphenolsprocyanidinsepicatechinbile acidsbile acids receptorsS1PR2CARPXR Disclosure statementDiana E. Roopchand has equity in Nutrasorb. Nutrasorb has no role in the design of the study; in the collection, analyses, or interpretation of data; in the writing of the manuscript, or in the decision to publish the results.Authors' contributionsSHH, KMT, DER planned the study. SHH and KMT performed the molecular docking, molecular simulations, and wrote the original draft of the manuscript. SHH, KMT, EM, and DER conceptualized, wrote, and edited the final draft of the manuscript.Additional informationFundingWe thank NIH/NCCIH for R01 AT010242 (DER) and F31 AT010981 (KMT) research support.
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