Caldovatus aquaticus sp. nov., a moderately thermophilic bacterium isolated from hot spring microbial mat

生物 16S核糖体RNA 嗜热菌 磷脂酰甘油 拉伤 系统发育树 微生物学 细菌 基因组DNA 基因 磷脂酰胆碱 遗传学 磷脂 解剖
作者
Chao‐Jian Hu,Wen-Dong Xian,Yiqing Lv,Chengxiang Peng,Rongxu Shan,Ze-Chang Cheng,Qian Lv,Ye Tian,Jian‐Yu Jiao,Sha Tan,Wen‐Jun Li
出处
期刊:International Journal of Systematic and Evolutionary Microbiology [Microbiology Society]
卷期号:72 (12) 被引量:4
标识
DOI:10.1099/ijsem.0.005627
摘要

Two closely related, aerobic, Gram-stain-negative, motile, oval-shaped, non-endospore-forming, moderately thermophilic bacteria, designated strains SYSU G05006T and SYSU G05005, were isolated from a bioreactor enrichment and the original sample was collected from Rehai National Park, Tengchong, Yunnan Province, PR China. The results of phylogenetic analysis based on the 16S rRNA gene sequences indicated that these two strains were closely related to Caldovatus sediminis YIM 72346T (96.75 and 96.89 % sequence similarity, respectively). The whole genome size of strain SYSU G05006T was 3.87 Mbp with a DNA G+C content of 75.33 mol%. The average nucleotide identity (ANI based on the MUMmer algorithm≤90.31 % and ANI based on blast≤89.36 %) and digital DNA-DNA hybridization (≤35.10 %) values between strain SYSU G05006T and other members of the family Acetobacteraceae were all lower than the threshold values recommended for distinguishing novel prokaryotic species. Optimal growth of the strain was observed at 55 °C and pH 6.0. Ubiquinone-10 was the predominant respiratory lipoquinone. The major cellular fatty acids included iso-C14 : 0, C16 : 1 ω5c, summed feature 5 and summed feature 7. The major polar lipids consisted of diphosphatidylglycerol, one unidentified aminolipid, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, two unidentified phospholipids and two unidentified lipids. Based on results of phylogenetic analyses, comparative genomics and phenotypic characteristics, we describe a new species of the genus Caldovatus represented by strain SYSU G05006T (=KCTC 82831T=MCCC 1K06125T), for which we propose the name Caldovatus aquaticus sp. nov.
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