化学
二聚体
单体
氢键
阿魏酸
圆二色性
结合常数
离解常数
分子动力学
烷基
疏水效应
结晶学
组蛋白八聚体
立体化学
分子
有机化学
计算化学
结合位点
聚合物
色谱法
生物化学
基因
核小体
组蛋白
受体
作者
Kourosh Abdollahi,Cameron Ince,Lloyd Condict,Andrew Hung,Stefan Kasapis
标识
DOI:10.1016/j.foodhyd.2019.105461
摘要
Abstract Interactions between β-lactoglobulin and ferulic acid were investigated at ambient temperature in relation to the dimer and monomer forms of the protein at pH 7.3 and 2.4, respectively. To this end, molecular dynamics (MD) simulations and a variety of spectroscopic methods were employed. Circular dichroism (CD) and Fourier transform infrared (FTIR) analysis indicate that the secondary structure of the protein is altered upon complexation, suggesting molecular interactions do occur in both the monomer and dimer forms. However, UV–vis measurements of β-lactoglobulin remain constant upon complexation with ferulic acid, indicating that interactions are non-covalent in nature and are likely stabilised by hydrophobic forces and hydrogen bonds. Fluorescence quenching confirms the presence of a binding state, with the monomeric complex producing a stronger dissociation constant than the dimeric counterpart. Docking studies and MD simulations indicate that the preferred binding site in the dimer form (pH 7.3) lies at the interface of the two monomers. In contrast, the preferred binding site for the monomer form (pH 2.4) lies within the calyx shaped β-barrel structure and is stabilised by hydrogen bonds and π - alkyl interactions.
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